Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00185 and BL03265
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence pep-align/BSNT_00185___ispD.1.5803.seq
# -bsequence pep-align/BL03265___ispD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00185___ispD-BL03265___ispD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00185___ispD-BL03265___ispD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00185___ispD
# 2: BL03265___ispD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 160/232 (69.0%)
# Similarity: 192/232 (82.8%)
# Gaps: 1/232 ( 0.4%)
# Score: 813.0
#
#
#=======================================
BSNT_00185___ 1 MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKII 50
|:|:||||||||||||.||:||||||.||.|||||||:||::|..|.:||
BL03265___isp 1 MNYEVVIPAAGQGKRMNAGKNKLFIEAKGIPVIIHTLKVFENHDACKRII 50
BSNT_00185___ 51 LVINEQEREHFQQLLCDYPFQTSIELVAGGEERQHSVYKGLKAVKQEKIV 100
|||||||...|..||..|.|:|.||:|.||.|||.||:.|:||..:|:.|
BL03265___isp 51 LVINEQEFGEFNTLLKTYHFKTPIEMVPGGRERQQSVFAGIKAAGKEETV 100
BSNT_00185___ 101 LVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETI 150
|||||||||||.|.|::|:.:|::|||||:|||||||||||||.:::.||
BL03265___isp 101 LVHDGARPFIKREYIEQLVEKAKETGAAIVAVPVKDTIKRVQDGEIAGTI 150
BSNT_00185___ 151 ERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRV 200
|||||||.|||||||||:||.||.|||.|||||||||||||: .||:|.:
BL03265___isp 151 ERSSLWAAQTPQAFRLSILMNAHLEAEAKGFLGTDDASLVEE-AGGTVAI 199
BSNT_00185___ 201 VEGSYTNIKLTTPDDLTSAEAIMESESGNKHV 232
::|.|.||||||||||..||||:|:|..|:||
BL03265___isp 200 IQGDYQNIKLTTPDDLLVAEAILEAEKRNEHV 231
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