Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01889 and BL03256

See DNA alignment / Visit BSNT_01889 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01889___yjzD.1.5803.seq
#    -bsequence pep-align/BL03256___yjzD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01889___yjzD-BL03256___yjzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01889___yjzD-BL03256___yjzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: BL03256___yjzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      29/61 (47.5%)
# Similarity:    46/61 (75.4%)
# Gaps:           0/61 ( 0.0%)
# Score: 179.0
# 
#
#=======================================

BSNT_01889___      1 MRYIIAFIWTFLLSHMACYLVASMNSVTYNFKTSSVIAVVLYVLIMVLAE     50
                     ||:::||.|||||:.||||:|.:||...|:.:||.::..::...::||.|
BL03256___yjz      1 MRFVVAFFWTFLLTQMACYIVGAMNGAGYDLQTSVIMGFIITAAVIVLGE     50

BSNT_01889___     51 IMPMNKNASQH     61
                     |||:.::||||
BL03256___yjz     51 IMPVKQDASQH     61


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