Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01889 and BL03256
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01889___yjzD.1.5803.seq
# -bsequence dna-align/BL03256___yjzD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01889___yjzD-BL03256___yjzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01889___yjzD-BL03256___yjzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: BL03256___yjzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 123/203 (60.6%)
# Similarity: 123/203 (60.6%)
# Gaps: 34/203 (16.7%)
# Score: 366.5
#
#
#=======================================
BSNT_01889___ 1 GTGCGATATATTATTGCCTTTATTTGGACGTTCCTTTTATCACATATGGC 50
|||||||.|.|..|.||.|||.|.|||||.||.|||||..|.||.|||||
BL03256___yjz 1 GTGCGATTTGTGGTCGCTTTTTTCTGGACATTTCTTTTGACGCAGATGGC 50
BSNT_01889___ 51 ATGCTACTTGGTTGCAAGCATGAACAGCGTTACGTAT-AATTTCAAAACA 99
.||||||.|.||.|....|||||||.|.|.|..|||| |..||||||.||
BL03256___yjz 51 CTGCTACATTGTCGGCGCCATGAACGGTGCTGGGTATGACCTTCAAACCA 100
BSNT_01889___ 100 TCATCTGTCATTGCTGTTGTACTGTAT-GTCTTAATC------------- 135
.|||||| ||| |.|||.|||
BL03256___yjz 101 ----GTGTCAT-------------TATGGGCTTTATCATCACCGCAGCCG 133
BSNT_01889___ 136 --ATGGTTTTAGCAGAAATCATGCCTATGAACAAAAATGCAAGCCAGCAT 183
||.|||.|.|.||||||.||||||.|.||..|..|||||||.||.|||
BL03256___yjz 134 TTATTGTTCTTGGAGAAATTATGCCTGTTAAACAGGATGCAAGTCAACAT 183
BSNT_01889___ 184 TAA 186
|||
BL03256___yjz 184 TAA 186
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