Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01869 and BL03254

See DNA alignment / Visit BSNT_01869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01869___yitU.1.5803.seq
#    -bsequence pep-align/BL03254___yitU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01869___yitU-BL03254___yitU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01869___yitU-BL03254___yitU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01869___yitU
# 2: BL03254___yitU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     212/270 (78.5%)
# Similarity:   253/270 (93.7%)
# Gaps:           0/270 ( 0.0%)
# Score: 1205.0
# 
#
#=======================================

BSNT_01869___      1 METKPYLIALDLDGTLLKDDKTISENTLQTIQRLKDDGHYVCISTGRPYR     50
                     |||||||||||||||||||||||||::.:.|::|::||||||||||||:|
BL03254___yit      1 METKPYLIALDLDGTLLKDDKTISESSSEVIRKLREDGHYVCISTGRPFR     50

BSNT_01869___     51 SSSMYYQQMELTTPIVNFNGAFVHHPQDDSWGRYHTSLPLDVVKQLVDIS    100
                     :|||||.|::|.||||||||||||||:|:||||:||||.|:||||::::|
BL03254___yit     51 ASSMYYDQLQLDTPIVNFNGAFVHHPKDESWGRFHTSLDLEVVKQIIEVS    100

BSNT_01869___    101 ESYNVHNVLAEVIDDVYFHYHDEHLIDAFNMNTTNVTVGDLRENLGEDVT    150
                     |:|||||:|||::||||||||||.|||.|.|.:.|:||||||.|||:|||
BL03254___yit    101 ETYNVHNILAEIVDDVYFHYHDEKLIDVFTMGSPNITVGDLRTNLGQDVT    150

BSNT_01869___    151 SVLIHAKEEDVPAIRSYLSDVHAEVIDHRRWAAPWHVIEIIKSGMNKAVG    200
                     ||||||||||||||||||||||||::|||||||||||||:||||:|||||
BL03254___yit    151 SVLIHAKEEDVPAIRSYLSDVHAEMVDHRRWAAPWHVIELIKSGINKAVG    200

BSNT_01869___    201 LQKISDYYGLPRERIIAFGDEDNDLEMLEFAGCGVAMGNGIDAVKQIANR    250
                     |:||:||||:|.||:||||||||||||||||||||||||||:.||.:||:
BL03254___yit    201 LEKITDYYGIPPERVIAFGDEDNDLEMLEFAGCGVAMGNGIEGVKSVANK    250

BSNT_01869___    251 TTATNEEDGVARFLKEYFSL    270
                     .|.:|||||:|.|||:||:|
BL03254___yit    251 VTKSNEEDGIAVFLKDYFAL    270


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