Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01894 and BL03251
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_01894___med.1.5803.seq
# -bsequence pep-align/BL03251___med.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01894___med-BL03251___med.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01894___med-BL03251___med.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01894___med
# 2: BL03251___med
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 214/318 (67.3%)
# Similarity: 260/318 (81.8%)
# Gaps: 2/318 ( 0.6%)
# Score: 1170.0
#
#
#=======================================
BSNT_01894___ 1 MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKG 50
|:.|||.||.:||.|||||::|.||||||||:|.||||||.|||||||||
BL03251___med 1 MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKG 50
BSNT_01894___ 51 LLNIQSKYNVDVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEVF 100
||.|||.||||||||||:..:..|..|:|||||:||||:|||||||.:.|
BL03251___med 51 LLRIQSVYNVDVYYKEGIDNDAAIKMAVEDFHKKGVNLIYGHGSEYEKAF 100
BSNT_01894___ 101 NLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQ 150
|.:.:||||:.||:.|:||...||||:...||||||||||||||.|||.:
BL03251___med 101 NEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKK 150
BSNT_01894___ 151 VGVIASFTWQPEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKM 200
:||:|::.|||||:||.:||||.:|||||.|:|...|||...|||||:||
BL03251___med 151 IGVLATYKWQPEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKM 200
BSNT_01894___ 201 KNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDLGENTVLTSTV 250
|..|||||||||||||||||:|||||||||||||:|||:||||.|||||:
BL03251___med 201 KKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSELGENVVLTSTI 250
BSNT_01894___ 251 QNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRI 300
|:||.|||:.|::||||||:||...:|:..||:|||.|||:||:.||:::
BL03251___med 251 QHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKM 300
BSNT_01894___ 301 AKLIKTYNKTGELPKNE- 317
.:||..|.||.:|| ||
BL03251___med 301 NRLIDEYKKTNKLP-NEH 317
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