Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01890 and BL03248

See DNA alignment / Visit BSNT_01890 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01890___yjaU.1.5803.seq
#    -bsequence pep-align/BL03248___yjaU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01890___yjaU-BL03248___yjaU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01890___yjaU-BL03248___yjaU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01890___yjaU
# 2: BL03248___yjaU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     165/244 (67.6%)
# Similarity:   200/244 (82.0%)
# Gaps:           0/244 ( 0.0%)
# Score: 914.0
# 
#
#=======================================

BSNT_01890___      1 MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYG     50
                     |.||||:||:.:|.||:||||:||||.:||.|||.||||.|||||.||||
BL03248___yja      1 MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYG     50

BSNT_01890___     51 RNQLLSMLRNEGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPK    100
                     |||||:.|||:||||.||||||||||:||||.|||||||.|.||||||.|
BL03248___yja     51 RNQLLTSLRNKGYTLVNSNLFGRHWGSEKAVAYAKQLIHYVFKQEILNEK    100

BSNT_01890___    101 IHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFY    150
                     ||:||||.|||:||||||..|:.|||.||:|||||||||::.||||||||
BL03248___yja    101 IHLLAEGTGALIADELLRSIPNQIRSTAMVNPCLDLQAHHKREKENKFFY    150

BSNT_01890___    151 KQFLKEVSKSYGISEKEAEALRYKTIQSYPSGVPVHIWQRMTGAPYPYSV    200
                     |||:||:::||||:|:||....:|:|..|.:.||||||||:.|:||||.:
BL03248___yja    151 KQFIKEIAESYGITEREAADYPFKSISPYHNLVPVHIWQRLNGSPYPYMI    200

BSNT_01890___    201 HAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSHEKEL    244
                     ||:.|:|:|.|....|.:|.||.|||.||:::|..||.:|||.|
BL03248___yja    201 HAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTHEKVL    244


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