Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_01884 and BL03246

See DNA alignment / Visit BSNT_01884 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01884___carB.1.5803.seq
#    -bsequence pep-align/BL03246___carB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01884___carB-BL03246___carB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01884___carB-BL03246___carB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01884___carB
# 2: BL03246___carB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1030
# Identity:     814/1030 (79.0%)
# Similarity:   908/1030 (88.2%)
# Gaps:           1/1030 ( 0.1%)
# Score: 4189.0
# 
#
#=======================================

BSNT_01884___      1 MPKDTSISSILVIGSGPIIIGQAAEFDYSGTQGCIALKEEGYRVILVNSN     50
                     ||||.:|.||||||||||||||||||||||||||:|||.|||||||||||
BL03246___car      1 MPKDQTIKSILVIGSGPIIIGQAAEFDYSGTQGCMALKSEGYRVILVNSN     50

BSNT_01884___     51 PATIMTDEAFADEIYFEPLTAESLTAIIKKEQPDGLLANLGGQTALNLAV    100
                     ||||||||:|||||||||||.||||.|||:|:||||||||||||||||||
BL03246___car     51 PATIMTDESFADEIYFEPLTVESLTQIIKREKPDGLLANLGGQTALNLAV    100

BSNT_01884___    101 ELEETGVLKEHGVKLLGTSVETIQKGEDREKFRSLMNELNQPVPESEIVD    150
                     |||:.|:||.:|||||||||:||:|||||||||:||.|||:|||:|||||
BL03246___car    101 ELEKAGILKAYGVKLLGTSVDTIEKGEDREKFRALMKELNEPVPDSEIVD    150

BSNT_01884___    151 NETDAIRFAESIGFPVIIRPAYTLGGKGGGIAPDKEAFTAMIKQALLASP    200
                     |:.||:|||.|||||:|:||||||||||||||..||.|..:|:.||||||
BL03246___car    151 NQDDALRFALSIGFPIIVRPAYTLGGKGGGIAATKEEFLPLIESALLASP    200

BSNT_01884___    201 INQCLVEKSIAGFKEIEYEVMRDSNNTCITVCNMENIDPVGVHTGDSIVV    250
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BL03246___car    201 IHQCLVEKSIAGFKEIEYEVMRDSNNTCITVCNMENIDPVGVHTGDSIVV    250

BSNT_01884___    251 APSQTLTDEDYQMLRTASLTIISALDVVGGCNIQFALDPFSKQYYVIEVN    300
                     ||||||||.||||||:|||.|||||||||||||||||||.||.|||||||
BL03246___car    251 APSQTLTDADYQMLRSASLKIISALDVVGGCNIQFALDPESKNYYVIEVN    300

BSNT_01884___    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLDELKNPLTGSTYASFEPAL    350
                     |||||||||||||||||||||||||||||||.|||||||.||||||||||
BL03246___car    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLAELKNPLTDSTYASFEPAL    350

BSNT_01884___    351 DYVIVKFPRWPFDKFKNADRKLGTKMKATGEVMAIERNLEAAIQKAAASL    400
                     |||:||||||||||||.||||||||||||||||||:||||||:|||.|||
BL03246___car    351 DYVVVKFPRWPFDKFKQADRKLGTKMKATGEVMAIDRNLEAALQKAVASL    400

BSNT_01884___    401 ELKNIGTHLPELSGLSIDTLWDLAITPDDRRFFVVMELLSRSVSIDDIHE    450
                     |||..|||||||.|:|.:.||.|..||||||||.|||||||..||.:|||
BL03246___car    401 ELKTSGTHLPELGGVSSEVLWKLLETPDDRRFFAVMELLSRGTSISEIHE    450

BSNT_01884___    451 KTKIDPFFLHTFDNIIKLENRLMEAGSDLSFELLKKAKEKGFSDATIASL    500
                     |||||.:|||.|.|||:|||.|||.|..||..||||.|||||:|.|||||
BL03246___car    451 KTKIDDYFLHVFSNIIQLENTLMEQGDSLSVSLLKKVKEKGFTDFTIASL    500

BSNT_01884___    501 IGKTEEEVRALRKEMGITPSFKIVDTCAAEFDAKTNYFYSTYFGETDGDI    550
                     .||||||||||||:|||..|||||||||||||||||||||||||::||||
BL03246___car    501 TGKTEEEVRALRKKMGIAASFKIVDTCAAEFDAKTNYFYSTYFGKSDGDI    550

BSNT_01884___    551 SRKEKKRALIIGSGPIRIGQGVEFDNSAVHGVLTLQELGFETIMINNNPE    600
                     |:|.|||||||||||||||||||||.||||||:||:.|||||||:|||||
BL03246___car    551 SQKTKKRALIIGSGPIRIGQGVEFDYSAVHGVMTLKSLGFETIMLNNNPE    600

BSNT_01884___    601 TVSTDYEIADRLYFEPMTTEHIVNVAEQENIDFAIVQFGGQTAINAAEAL    650
                     |||||||:||||||||:|.|||:||||.|:|||||||||||:|||.|:|:
BL03246___car    601 TVSTDYEMADRLYFEPITPEHILNVAEAEDIDFAIVQFGGQSAINVAQAI    650

BSNT_01884___    651 EKAGITLLGTSFQTLDVLEDRDQFYQLLDELGLKHAKGEIAYTKEEAASK    700
                     |||||||||||.:|||:|||||||||||||||:.|||||.|.:|.||..|
BL03246___car    651 EKAGITLLGTSSETLDILEDRDQFYQLLDELGISHAKGETASSKAEAVKK    700

BSNT_01884___    701 ASEIGYPVLIRPSYVIGGMGMIIVDSQAQLSQLLNDEDSMPYPILIDQYV    750
                     |:|||||||||||||||||||:||.|:|:|.:||.....|||||||||||
BL03246___car    701 ANEIGYPVLIRPSYVIGGMGMMIVHSEAELRELLGGASQMPYPILIDQYV    750

BSNT_01884___    751 SGKEVEIDLISDGEDVFIPTYTEHIERAGVHSGDSFAILPGPSITSGLQQ    800
                     ||||.||||:|||.|::||||.||||:||||||||:|||||||:|..::.
BL03246___car    751 SGKEFEIDLVSDGGDLYIPTYIEHIEKAGVHSGDSYAILPGPSVTPEMKS    800

BSNT_01884___    801 GMKDAAQKIARKLSFKGIMNIQFVIDNGNILVLEVNPRASRTVPVVSKVM    850
                     ..:|||.||.|||.|||||||||:.|:..:|:||||||||||||||||||
BL03246___car    801 AARDAAAKIVRKLGFKGIMNIQFIADSDELLILEVNPRASRTVPVVSKVM    850

BSNT_01884___    851 GVPMIPLATRLLAGASLKDLDPAVQNHHGVAVKFPVFSSHAIQDVDIKLG    900
                     ||||||||.:||||:|||:|.||.:|..||||||||||||||||||:|||
BL03246___car    851 GVPMIPLAAKLLAGSSLKELKPAAKNSRGVAVKFPVFSSHAIQDVDLKLG    900

BSNT_01884___    901 PEMKSTGEGMCVAYDSNSALKKIYTRVWSQKGSIYLQNVPEDVQELAENA    950
                     ||||||||||.|.::..||||||:..:|..||.||::...| ::.|||.|
BL03246___car    901 PEMKSTGEGMYVGFNPESALKKIFAGIWQTKGCIYMEGAGE-LRSLAEQA    949

BSNT_01884___    951 GFTVHEGTFASWMEQEEKSLHINLSGSEEARIERLEAMTHGIPVFTEEET   1000
                     ||||....|..|:::::|:|||:|:.|:|||.:|:||:|||:.|.|||||
BL03246___car    950 GFTVQSDDFPGWIKRKDKALHIHLAESKEARKQRIEAVTHGVAVMTEEET    999

BSNT_01884___   1001 VRAFLQSGSGHPQPVSLKDLYKKEVASCTQ   1030
                     |||||.||.|..:.|||||||||||.:|..
BL03246___car   1000 VRAFLTSGHGTTKAVSLKDLYKKEVETCLL   1029


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01884 and BL03246

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
