Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01881 and BL03243

See DNA alignment / Visit BSNT_01881 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01881___argB.1.5803.seq
#    -bsequence pep-align/BL03243___argB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01881___argB-BL03243___argB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01881___argB-BL03243___argB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01881___argB
# 2: BL03243___argB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     189/258 (73.3%)
# Similarity:   217/258 (84.1%)
# Gaps:           0/258 ( 0.0%)
# Score: 952.0
# 
#
#=======================================

BSNT_01881___      1 MKKTIVFKCGGSVIRELSEEFFQNLKELMASGWKLAIVHGGGPEITNMLK     50
                     |.||||||||||||||||:|||||||:|..||||:|:||||||:||.|||
BL03243___arg      1 MGKTIVFKCGGSVIRELSDEFFQNLKDLTESGWKIALVHGGGPDITKMLK     50

BSNT_01881___     51 RLNIKTEFSGGQRKTTKPVLEVAEMVLSGSVNKFFVAELAKHGLRAAGIS    100
                     :|||:|||..|||||||.||||||||||||:||||||||.||||.|.|:|
BL03243___arg     51 KLNIRTEFVNGQRKTTKAVLEVAEMVLSGSINKFFVAELTKHGLPAVGVS    100

BSNT_01881___    101 GKDGGLLEADYLDPETHGEVGEIKKVDASMVNALMENGIIPVIAPLSMTS    150
                     |||||||.||||:.:.:|:||.||||:..|..||||.|.||||||||||.
BL03243___arg    101 GKDGGLLLADYLNEKEYGQVGRIKKVNGQMAEALMEKGFIPVIAPLSMTD    150

BSNT_01881___    151 DCKTLNVNADLAASAVAGALEADKLMFVTDVDGIMKEKQRLDVLTPKEIQ    200
                     .|:||||||||||||||.||.||||||||||.||||.::.|..|||::|:
BL03243___arg    151 GCETLNVNADLAASAVAAALRADKLMFVTDVKGIMKNEEMLKELTPEDIE    200

BSNT_01881___    201 MLIKQEVITGGMIPKVNSALSALSDQVSEVMIVNGKGSFFAEQTFQGTKI    250
                     .||.:.||:|||||||:||..||:|:|.|||||:|||||..:..|.||||
BL03243___arg    201 SLIAEGVISGGMIPKVHSAKEALTDEVEEVMIVSGKGSFLTKDDFIGTKI    250

BSNT_01881___    251 VKAKEAVS    258
                     :|.|||||
BL03243___arg    251 IKQKEAVS    258


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