Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01870 and BL03239

See DNA alignment / Visit BSNT_01870 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01870___yitV.1.5803.seq
#    -bsequence pep-align/BL03239___yitV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01870___yitV-BL03239___yitV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01870___yitV-BL03239___yitV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01870___yitV
# 2: BL03239___yitV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     156/255 (61.2%)
# Similarity:   193/255 (75.7%)
# Gaps:           0/255 ( 0.0%)
# Score: 828.0
# 
#
#=======================================

BSNT_01870___      1 MIQIENQTVSGIPFLHIVKEENRHRAVPLVIFIHGFTSAKEHNLHIAYLL     50
                     ||.||.|.:|.||.|||||||.:.:|:|||.||||||||||||||.||||
BL03239___yit      1 MIIIEKQHISNIPLLHIVKEEKKEKALPLVFFIHGFTSAKEHNLHFAYLL     50

BSNT_01870___     51 AEKGFRAVLPEALHHGERGEEMAVEELAGHFWDIVLNEIEEIGVLKNLFE    100
                     ||||.|.:|||||:||||.|::..||||..||:||.|||:|:.||||.||
BL03239___yit     51 AEKGMRVILPEALYHGERNEQLTQEELAPRFWEIVTNEIKELEVLKNHFE    100

BSNT_01870___    101 KEGLIDGGRIGLAGTSMGGITTLGALTAYDWIKAGVSLMGSPNYVELFQQ    150
                     :|.:|:.||||.||||||||.||||||.|:||...|||||||.|||.|.|
BL03239___yit    101 RENMIEKGRIGAAGTSMGGIVTLGALTQYEWITTAVSLMGSPAYVEFFDQ    150

BSNT_01870___    151 QIDHIQSQGIEIDVPEEKVQQLMKRLELRDLSLQPEKLQQRPLLFWHGAK    200
                     |:..::.:.||:.:.||::.|..:.|:..||||||:||..||||||||.:
BL03239___yit    151 QLAFMREKKIELPITEEQIDQQREELKRFDLSLQPDKLNMRPLLFWHGKQ    200

BSNT_01870___    201 DKVVPYAPTRKFYDTIKSHYSEQPERLQFIGDENADHKVPRAAVLKTIEW    250
                     |..||:|.||:||::|...|..:|:.|.||.||.|.|||.|..:|||:||
BL03239___yit    201 DGTVPFALTRRFYESIIPLYEARPDLLHFIEDERAGHKVSREGLLKTVEW    250

BSNT_01870___    251 FETYL    255
                     |:.:|
BL03239___yit    251 FDAHL    255


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