Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05209 and BL03218

See DNA alignment / Visit BSNT_05209 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_05209___yvdS.1.5803.seq
#    -bsequence pep-align/BL03218___yvdS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05209___yvdS-BL03218___yvdS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05209___yvdS-BL03218___yvdS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05209___yvdS
# 2: BL03218___yvdS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:      77/111 (69.4%)
# Similarity:    97/111 (87.4%)
# Gaps:           0/111 ( 0.0%)
# Score: 425.0
# 
#
#=======================================

BSNT_05209___      1 MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKI     50
                     |:|:||..||.|||||||.||||||.:||::||:|||||||:|||||:.|
BL03218___yvd      1 MSWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNI     50

BSNT_05209___     51 PMAAAYTVFVGIGTVGTYLTGIVLGESFSAAQMFFLALLLAGILGMKLFT    100
                     |||:||||||||||.|||:|||.:||:||..|:|||.:||.||:|||:||
BL03218___yvd     51 PMASAYTVFVGIGTAGTYVTGIFMGETFSGGQIFFLIVLLGGIIGMKMFT    100

BSNT_05209___    101 KESKSQPGGEQ    111
                     ||:.:|.||::
BL03218___yvd    101 KENNAQSGGDE    111


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