Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05211 and BL03217

See DNA alignment / Visit BSNT_05211 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_05211___yvdR.1.5803.seq
#    -bsequence pep-align/BL03217___yvdR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05211___yvdR-BL03217___yvdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05211___yvdR-BL03217___yvdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05211___yvdR
# 2: BL03217___yvdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      80/106 (75.5%)
# Similarity:    91/106 (85.8%)
# Gaps:           1/106 ( 0.9%)
# Score: 417.0
# 
#
#=======================================

BSNT_05211___      1 MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTLGFGLSFYCLSQAM     50
                     |.|..|||:||||:||||||||:||||||||||||.|||||||:|||:||
BL03217___yvd      1 MPWMFLVISGIEEVIAAIAMKYVDGTRKKWPIIVMVLGFGLSFFCLSKAM     50

BSNT_05211___     51 IVLPAGVAYAVWTGIGSIGVSAVGLIWFKERFQLSQVISLCLILAGVIGL    100
                     .:|.|||||||||||||||::||.|.|||||.:..|:|||..|:.|||||
BL03217___yvd     51 QMLSAGVAYAVWTGIGSIGITAVSLFWFKERIRAPQLISLGFIIIGVIGL    100

BSNT_05211___    101 RLTSSS    106
                     ||||| 
BL03217___yvd    101 RLTSS-    105


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