Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01501 and BL03206

See DNA alignment / Visit BSNT_01501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_01501___ssuB.1.5803.seq
#    -bsequence pep-align/BL03206___ssuB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01501___ssuB-BL03206___ssuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01501___ssuB-BL03206___ssuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01501___ssuB
# 2: BL03206___ssuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     185/255 (72.5%)
# Similarity:   218/255 (85.5%)
# Gaps:           0/255 ( 0.0%)
# Score: 981.0
# 
#
#=======================================

BSNT_01501___      1 MAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLK     50
                     |:::|.:.||||.:...|.:||:::.|::..|||||:|||||||||||||
BL03206___ssu      1 MSLSIRVNEKAFGKGSFKTSVLQDVNLTVENGEFLTVIGPSGCGKSTLLK     50

BSNT_01501___     51 IIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNIAADL    100
                     |.||||.:|:|.:.:|||.:..|||||||||||||||||:||||||||||
BL03206___ssu     51 IAAGLDGDYEGRISMNGREIKGPGIQQGFIFQEHRLFPWMTVEQNIAADL    100

BSNT_01501___    101 NLNDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPE    150
                     :|.:|.|::|||||||.|||||:||.||||||||||||||||||||||||
BL03206___ssu    101 SLKEPAVRKKVDELIETVRLKGAEKQYPRELSGGMSQRVAIARALLREPE    150

BSNT_01501___    151 VLLLDEPFGALDAFTRKHLQDVLLDIWRRKKTTMILVTHDIDESVYLGNE    200
                     :||||||||||||||||||||||.||||.||.|||||||||||||||.|.
BL03206___ssu    151 ILLLDEPFGALDAFTRKHLQDVLTDIWREKKMTMILVTHDIDESVYLANR    200

BSNT_01501___    201 LAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSEFEKTEDLEYA    250
                     :|||.||||:||||:|:.|.:||:||:|.||.|||:||.|||.||...:.
BL03206___ssu    201 IAILTAKPGRIHKLIPVDLPFPRSRTSPVFQTIRQKVLKEFETTETFSFQ    250

BSNT_01501___    251 EGSGI    255
                     |||||
BL03206___ssu    251 EGSGI    255


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