Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01504 and BL03204

See DNA alignment / Visit BSNT_01504 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_01504___ssuC.1.5803.seq
#    -bsequence pep-align/BL03204___ssuC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01504___ssuC-BL03204___ssuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01504___ssuC-BL03204___ssuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01504___ssuC
# 2: BL03204___ssuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     198/282 (70.2%)
# Similarity:   239/282 (84.8%)
# Gaps:          10/282 ( 3.5%)
# Score: 1020.0
# 
#
#=======================================

BSNT_01504___      1 MMKAEAAGS---LPKTNAEAVRKKPGRKRYGFMKGLLLPAVIIAIWQVIG     47
                      |:|.::.:   .|||.|   :.:|...|..:.||.:||.::|.:||::|
BL03204___ssu      1 -MRAVSSSTPSIQPKTGA---KLRPAAFRLAWGKGFVLPVMLILLWQLVG     46

BSNT_01504___     48 GLGIVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAGL     97
                     .|.::|.||||.|:.|:|||::||:|||||.||.|||.||||||.|||||
BL03204___ssu     47 SLELISKTVLPAPLDILLTFRDLIVSGELFTHLGISIQRAALGFFLGAGL     96

BSNT_01504___     98 GLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKIL    147
                     ||::|::.||||..|.|||||||||||||||||||||||||||||:||:|
BL03204___ssu     97 GLLLGLVIGFSKIAEDYLDPSLQMLRTVPHLAVTPLFILWFGFDELSKVL    146

BSNT_01504___    148 LIALGAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALP    197
                     |||||||||||||||:||||||:|||:|||||||.|.:|::|:||||:||
BL03204___ssu    147 LIALGAFFPVYINTFSGIRGVDSKLFDVARVLEFHWLKQVTKLILPASLP    196

BSNT_01504___    198 NILLGIRLSLGIAWLGLVVAELMGSSAGVGYMIMDARQFSQTNKVFAGII    247
                     |||||||||||::|||||||||||||||||||||||||||||:|||.||:
BL03204___ssu    197 NILLGIRLSLGVSWLGLVVAELMGSSAGVGYMIMDARQFSQTDKVFVGIL    246

BSNT_01504___    248 IFAVVGKLTDSFVRLLERKLLKWRNSYEG---    276
                     |||.||||||||||:||:|.|.|||||:|   
BL03204___ssu    247 IFAAVGKLTDSFVRILEKKCLGWRNSYQGNKK    278


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