Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01515 and BL03195

See DNA alignment / Visit BSNT_01515 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence pep-align/BSNT_01515___yhbB.1.5803.seq
#    -bsequence pep-align/BL03195___yhbB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01515___yhbB-BL03195___yhbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01515___yhbB-BL03195___yhbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01515___yhbB
# 2: BL03195___yhbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     180/306 (58.8%)
# Similarity:   226/306 (73.9%)
# Gaps:           6/306 ( 2.0%)
# Score: 979.5
# 
#
#=======================================

BSNT_01515___      1 MKHILEQLAEERLGFLVNGHAMRQESQVGDLKVMERKKKLLEKRKVDIIK     50
                     ||.|:|||.:.||.:|:||:........|..:|:|||::|.:||.|.|:|
BL03195___yhb      1 MKQIIEQLLKARLQYLINGNDETNWRDAGGFEVIERKRRLFQKRGVHIVK     50

BSNT_01515___     51 AKAKAVINHVRVEDDGTTCLSYTIHYEYVCKEQDDSLYIEEHIEERMAFL    100
                     |..:|.:....:::||.:.::|..|..|:||:.|| :|:|||:|:|.|.|
BL03195___yhb     51 ANIEAAVKEHWLDEDGASHVNYQTHTAYLCKDGDD-MYMEEHMEDRNALL     99

BSNT_01515___    101 YDHILISDQEIAKKPAGFHEGTSIIDYSEAEEEREAFGRAFQYDRLGAVQ    150
                     ||.::|.|.|..:..|..|......|    |:.||..||||:||||.||:
BL03195___yhb    100 YDQMVIKDSEALRPAAQSHPEPENGD----EDMRELLGRAFRYDRLAAVR    145

BSNT_01515___    151 YAEKFWNKRNPAYKNFSDNCTNFISQCLHAGGAPMRGHPNRGSGWWMKQS    200
                     |||.:|||||||||||.||||||||||:.||.|||||:||||.||||:..
BL03195___yhb    146 YAETYWNKRNPAYKNFEDNCTNFISQCIRAGDAPMRGYPNRGKGWWMQNH    195

BSNT_01515___    201 SWSYSWTVAHSMKMYLSNSKAGLRAVRVKSAEELMPGDVICYDFEGDGRF    250
                     |||||||||||::.:|.:||||||||:..:|:||:.||||||||.|||||
BL03195___yhb    196 SWSYSWTVAHSLRTFLKHSKAGLRAVQKPAAKELIEGDVICYDFNGDGRF    245

BSNT_01515___    251 NHTTIVVAKDKGNMPLVNAQTYDSRMRYWSYEDSTAYTQSIRYAFFHIVD    300
                     :|..:|.||||.|||||||||:|.||||||||||.|||.|||||||||.|
BL03195___yhb    246 DHVALVTAKDKSNMPLVNAQTHDCRMRYWSYEDSPAYTSSIRYAFFHISD    295

BSNT_01515___    301 DTTKE-    305
                     ||||. 
BL03195___yhb    296 DTTKSK    301


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