Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01530 and BL03187
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence pep-align/BSNT_01530___yhcA.1.5803.seq
# -bsequence pep-align/BL03187___yhcA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01530___yhcA-BL03187___yhcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01530___yhcA-BL03187___yhcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01530___yhcA
# 2: BL03187___yhcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 421/533 (79.0%)
# Similarity: 476/533 (89.3%)
# Gaps: 5/533 ( 0.9%)
# Score: 2179.5
#
#
#=======================================
BSNT_01530___ 1 MATGKEKNTKSPMTLLIVLMAGLFLAILNQTLLNVAMPHLMTEFGVSATT 50
||:.|:.| |:|||:||||||||||||||||||||||||||.|||||
BL03187___yhc 1 MASQKKGN----MSLLIILMAGLFLAILNQTLLNVAMPHLMTEFNVSATT 46
BSNT_01530___ 51 IQWLTTGYMLVNGVLIPLSAFLITRFGQRSLFLVAMFCFTLGTLVCGIAP 100
|||||||||||||||||||||||.|||.|||||.||..||.|||:|||:|
BL03187___yhc 47 IQWLTTGYMLVNGVLIPLSAFLIMRFGGRSLFLTAMLLFTAGTLICGISP 96
BSNT_01530___ 101 NFSTMLIGRLIQAVGGGILQPLVMTTILLIFPPESRGKGMGIFGLAMMFA 150
||||||.|||||||||||||||||||||.|||||||||||||||||||||
BL03187___yhc 97 NFSTMLTGRLIQAVGGGILQPLVMTTILFIFPPESRGKGMGIFGLAMMFA 146
BSNT_01530___ 151 PAVGPTLSGWIIEHYTWRIMFYGLVPIGAIVIIVAFFIFKNMVEPQKIKL 200
||||||||||:||:|:||||||.|||:|.||||..||:||||.||:||||
BL03187___yhc 147 PAVGPTLSGWVIENYSWRIMFYSLVPVGVIVIIFGFFLFKNMTEPKKIKL 196
BSNT_01530___ 201 DTLGAILSIVGFASLLYGVSEAGSDGWTDPIVLSTVIIGAIAIVAFVVQQ 250
||.|||||:||||:|||||||||||||.||||||||:||.|.|.||::||
BL03187___yhc 197 DTAGAILSVVGFAALLYGVSEAGSDGWDDPIVLSTVVIGVIGIAAFIIQQ 246
BSNT_01530___ 251 LRHDDPMLDFRVFKYDIFSLSSVINIIITVALYTGMFLLPIYLQNLVGFT 300
|:..:|||||||||||:||||||||.|||||||.||||:|||||||||||
BL03187___yhc 247 LKSKEPMLDFRVFKYDMFSLSSVINAIITVALYAGMFLIPIYLQNLVGFT 296
BSNT_01530___ 301 ALQSGLLLLPGAIVMLIMSPISGILFDKFGPRPLAIIGLLVTVVTTYQYT 350
|||||||:||||:|||:|||||||||||.|||||||:|||:||||||::|
BL03187___yhc 297 ALQSGLLMLPGALVMLVMSPISGILFDKVGPRPLAIVGLLITVVTTYEFT 346
BSNT_01530___ 351 QLTIDTPYTHIMLIYSIRAFGMSLLMMPVMTAGMNQLPARLNSHGTAMSN 400
.|||||||.:|:|||:|||||||:||||:|||||||||..||||||||||
BL03187___yhc 347 TLTIDTPYMYIVLIYAIRAFGMSMLMMPIMTAGMNQLPQHLNSHGTAMSN 396
BSNT_01530___ 401 TLRQISGSIGTSLITTIYTNRTTFHYSQIADKTSTADPNFLHAFQNAVSN 450
||||||||||||||||||||||||||:.:||:|:||||:|:...|:.:.:
BL03187___yhc 397 TLRQISGSIGTSLITTIYTNRTTFHYASMADQTNTADPSFMSTLQSTIQS 446
BSNT_01530___ 451 LMVNMNVSYDTAKTYVYSHIYKHASLDSNVMGINDAFMWATLFCVAGLIL 500
...:|::|.:.|:.||..::...|.|:|||||||||||||..|||.||:|
BL03187___yhc 447 TAQSMHISLEQAQQYVVKYLTGQAQLNSNVMGINDAFMWAAGFCVIGLVL 496
BSNT_01530___ 501 SIFLRDVRKDKLRKKKK-EELSLLPAPKEAKES 532
|:|||||||||||:|.| :||:|||||||||||
BL03187___yhc 497 SLFLRDVRKDKLRRKNKAQELTLLPAPKEAKES 529
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