Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01537 and BL03183

See DNA alignment / Visit BSNT_01537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01537___yhcH.1.5803.seq
#    -bsequence pep-align/BL03183___yhcH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01537___yhcH-BL03183___yhcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01537___yhcH-BL03183___yhcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: BL03183___yhcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     204/308 (66.2%)
# Similarity:   246/308 (79.9%)
# Gaps:           4/308 ( 1.3%)
# Score: 1040.0
# 
#
#=======================================

BSNT_01537___      1 MKTVLELKNVTKNIRGRTIINDLSFTIREGEVFGFLGPNGAGKTTTIRMM     50
                     |:|:||||||:|.|||:.||..|||.:|.||:|||||||||||||||||:
BL03183___yhc      1 METLLELKNVSKTIRGKKIIEGLSFDVRAGEIFGFLGPNGAGKTTTIRMI     50

BSNT_01537___     51 VGLMKLSKGDVLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQ    100
                     ||.|.::.|::.:||.|:.:.:.||.:|||||||||||||||:||:||||
BL03183___yhc     51 VGHMSITAGEIAVCGVSVKENFEKAARHIGAIVENPELYKFLTGYQNLQQ    100

BSNT_01537___    101 YARMVKGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHD    150
                     ||||.|||||:||||:||||||.:||:||||||||||||||||||.||||
BL03183___yhc    101 YARMTKGVTKKKIDEIVELVGLKNRINDKVKTYSLGMRQRLGLAQSLLHD    150

BSNT_01537___    151 PKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMC    200
                     ||:||||||||||||||||||||:|:|||||:||||||||||||||||||
BL03183___yhc    151 PKLLILDEPTNGLDPAGIREIRDYLRKLTREKGMAVIVSSHLLSEMELMC    200

BSNT_01537___    201 DRIAILQKGKLIDIQNVKDENIDENDTYFFQVEQP---NEAAAVLNQYDL    247
                     |||||:|.|||.|||:|.....||...|:.|.:..   ...||...:..:
BL03183___yhc    201 DRIAIIQNGKLRDIQHVHGPARDEKKRYYIQADDTQALTREAAAFRKVKV    250

BSNT_01537___    248 LSKTNGVEIKLAKDEVPAVIELLVMQQIRIYEVKVITKSLEDRFLEMTGE    297
                     .....|:|:.:.|||||.:|:.|....:|:||||.:.|||||||||:|.:
BL03183___yhc    251 DEAEGGIELSIQKDEVPDLIKHLTDSGVRLYEVKAVNKSLEDRFLEITAD    300

BSNT_01537___    298 TKEEVQHA    305
                      |||.||.
BL03183___yhc    301 -KEEAQHV    307


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