Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01537 and BL03183
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01537___yhcH.1.5803.seq
# -bsequence dna-align/BL03183___yhcH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01537___yhcH-BL03183___yhcH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01537___yhcH-BL03183___yhcH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: BL03183___yhcH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity: 657/980 (67.0%)
# Similarity: 657/980 (67.0%)
# Gaps: 118/980 (12.0%)
# Score: 2073.5
#
#
#=======================================
BSNT_01537___ 1 ATGAAAACAGTGTTGGAATTGAAAAACGTGACTAAAAAC-ATCAGAGGCC 49
.||.|||||.|.||||||||.|||||.|| |..|||||| |||||.||..
BL03183___yhc 1 TTGGAAACACTTTTGGAATTAAAAAATGT-ATCAAAAACGATCAGGGGGA 49
BSNT_01537___ 50 GAACGATCATTAATGATCTCAGTTTT-ACGATTCGTGAAGGCGAGGTATT 98
.||.||||||..|.|...|.|||||| ||| |.||.|.|||||||.||||
BL03183___yhc 50 AAAAGATCATCGAGGGCTTGAGTTTTGACG-TGCGGGCAGGCGAGATATT 98
BSNT_01537___ 99 CGGTTTTTTAGGACCAAACGGAGCGGGGAAAACGACAACCATCCGGATGA 148
|||.||..|.||.||.|||||.||.||.||||||||.||.||||||||||
BL03183___yhc 99 CGGCTTCCTGGGGCCGAACGGCGCCGGAAAAACGACGACGATCCGGATGA 148
BSNT_01537___ 149 TGGTGGGGTTAATGAAGC--TGTCGAAAGGTGATGTCCTCATTTGCGGCC 196
|.||.||....||| ||| |..|| ..|||||..||..|.|.||||||
BL03183___yhc 149 TTGTCGGACATATG-AGCATTACCG-CCGGTGAAATCGCCGTGTGCGGC- 195
BSNT_01537___ 197 AATCAATTACG--AAAGAA---TATGCCAAGGCGATTAA--GCATATTGG 239
.||| .|| |||||| |.||..||||| |..| ||||||.||
BL03183___yhc 196 -GTCA---GCGTAAAAGAAAACTTTGAAAAGGC--TGCACGGCATATCGG 239
BSNT_01537___ 240 AGCGATCGTTGAGAATCCCGAGCTGTATAAATTTTTGAGCGGATATAAAA 289
||||||||||||.||.||.|||||.|||||||||||.|..||.||..|||
BL03183___yhc 240 AGCGATCGTTGAAAACCCGGAGCTTTATAAATTTTTAACGGGCTACCAAA 289
BSNT_01537___ 290 ATCTCCAGCAATACGCAAGGATGGTCAAGGGTGTCACGAAGGAAAAAATT 339
|.||.|||||||||||..|.|||...||.||.||.|||||..|.||||||
BL03183___yhc 290 ACCTTCAGCAATACGCGCGCATGACGAAAGGCGTGACGAAAAAGAAAATT 339
BSNT_01537___ 340 GATGAAGTTGTTGAACTGGTCGGTTTAACAGACAGAATCCACGACAAGGT 389
||.|||.|.||.||.||.|||||.||.|.|.||||.|||.||||||||||
BL03183___yhc 340 GACGAAATCGTCGAGCTCGTCGGATTGAAAAACAGGATCAACGACAAGGT 389
BSNT_01537___ 390 GAAAACATATTCTCTGGGGATGAGACAGCGTCTTGGCTTGGCACAATGCC 439
.|||||.|||||..|.||.||||||||..|.||||||.|.||.|||.|||
BL03183___yhc 390 CAAAACGTATTCGTTAGGAATGAGACAAAGGCTTGGCCTTGCCCAAAGCC 439
BSNT_01537___ 440 TTCTGCACGATCCGAAAG-TGCTGATTTTGGATGAACCGACAAACGGCCT 488
||.|||||||||| |||| ||.|||||.|.|||||.|||||.|||||.||
BL03183___yhc 440 TTTTGCACGATCC-AAAGCTGTTGATTCTCGATGAGCCGACGAACGGGCT 488
BSNT_01537___ 489 TGATCCGGCGGGGATCAGAGAAATCAGAGATCATTTAAAGAAGCTGACCC 538
|||||||||.||.|||.|.||||||.|.||..||||||..||||||||..
BL03183___yhc 489 TGATCCGGCAGGTATCCGGGAAATCCGTGACTATTTAAGAAAGCTGACGA 538
BSNT_01537___ 539 GAGAAAGAGGAATGGCTGTCATCGTTTCAAGCCACCTGCTGTCAGAAATG 588
||||||..||||||||.|||||||||||||||||||||||.|||||||||
BL03183___yhc 539 GAGAAAAGGGAATGGCGGTCATCGTTTCAAGCCACCTGCTTTCAGAAATG 588
BSNT_01537___ 589 GAACTGATGTGTGATCGAATTGCGATTCTGCAAAAAGGAAAGCTGATCGA 638
||.||||||||.||..|.||.||.|||.|.|||||.||||||||....||
BL03183___yhc 589 GAGCTGATGTGCGACAGGATCGCCATTATTCAAAACGGAAAGCTCCGGGA 638
BSNT_01537___ 639 TATTCAAAATGT--------------------AAAAGATG----AAAACA 664
||||||..|||| |.||||.| |..|.|
BL03183___yhc 639 TATTCAGCATGTGCACGGACCCGCTCGGGATGAGAAGAAGCGCTATTATA 688
BSNT_01537___ 665 TTGATGAGAACGATACATATTTCTTCCAGGTTGAGCAGCCGAATGAAGCC 714
||.|.|.|.||||.|| |||||.| ..||..|| .|||||.
BL03183___yhc 689 TTCAAGCGGACGACAC---------CCAGGCT-CTCACACG--GGAAGCG 726
BSNT_01537___ 715 GCTGCTGTTTTAAATCAGTACGAT-----TTGCTGA---GTAAGACAAAT 756
|||||| .||||.|.|.| |||..|| |.|||.|
BL03183___yhc 727 GCTGCT-------TTCAGAAAGGTGAAGGTTGACGAAGCGGAAGGC---- 765
BSNT_01537___ 757 GGTGTAGA-------AATCAAACTGGCTAAAGACGAAGTCCCTGCGGTTA 799
||..|||| |.|||| ||.||.|||||.|||| |
BL03183___yhc 766 GGGATAGAGCTCAGCATTCAA-------AAGGATGAAGTGCCTG-----A 803
BSNT_01537___ 800 TTGAATT----GCTGGTGATGCAGCAAATCCGTATT------TATGAGGT 839
||..||| .|| ||| ||| |.|.|.||.|| |||||.||
BL03183___yhc 804 TTTGATTAAACACT--TGA--CAG-ACAGCGGTGTTCGCTTATATGAAGT 848
BSNT_01537___ 840 CAAGGTTAT-AACAAAATCATTAGAGGACCGTTTCTTAGAAATGACAGGT 888
.||||.|.| ||| |||||..|.||.|||||.|||.|.|||||.||.|..
BL03183___yhc 849 GAAGGCTGTGAAC-AAATCGCTGGAAGACCGATTCCTGGAAATCACCGCA 897
BSNT_01537___ 889 GAAACAAAAGAGGAGGTTCAGCATGCTTAA 918
|| .||.|||||.|.||||||||.||||
BL03183___yhc 898 GA---TAAGGAGGAAGCTCAGCATGTTTAA 924
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