Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01538 and BL03182

See DNA alignment / Visit BSNT_01538 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01538___yhcI.1.5803.seq
#    -bsequence pep-align/BL03182___yhcI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01538___yhcI-BL03182___yhcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01538___yhcI-BL03182___yhcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01538___yhcI
# 2: BL03182___yhcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     172/315 (54.6%)
# Similarity:   237/315 (75.2%)
# Gaps:           4/315 ( 1.3%)
# Score: 909.0
# 
#
#=======================================

BSNT_01538___      1 MLNLIYNEWLKIFSRAGTWVMIGILGLTMVGFAFLANHFSAGESNSHWKQ     50
                     |.|||.|||:|||:|.||:||||||.|.::|...|.......:.|:.||:
BL03182___yhc      1 MFNLIVNEWIKIFNRKGTYVMIGILLLAVIGLGVLTKTIGETDQNTDWKK     50

BSNT_01538___     51 ELQAQNAELKKEIK--EDPSLKDGYKETITLNDYRIEHNIPSDTGYTVWS     98
                     ||..:|.::|:::|  .:|:|:..|:::|.:|:|||:|::|:|..|:..|
BL03182___yhc     51 ELAQENKDMKEQLKGNSNPTLEKNYEQSIAINEYRIKHDLPADGDYSALS    100

BSNT_01538___     99 YVTDSANFTILTGLFTIIIAAGIVANEFNWGTIKLLMIRPLSRFQILMSK    148
                     :::|::....|.|||.|.:|||||||||:|||:|||:|||:|||:||::|
BL03182___yhc    101 FISDTSGLISLAGLFVITVAAGIVANEFSWGTVKLLVIRPISRFKILLAK    150

BSNT_01538___    149 YITVLLFGLLLLLILFIGSTLLGLIFFGTGGETAANIHLIYKDGHVIEQN    198
                     |.|||||.|.||.|||..:.:.||..||.|  .::.:||:|..|.|.|::
BL03182___yhc    151 YFTVLLFALALLFILFASAGITGLALFGAG--DSSQVHLVYVGGTVEEKS    198

BSNT_01538___    199 MMGHLATTYLSESVSALMVATMAFMLSAVFRNSSLAVGFSIFLLVAGTIA    248
                     ::.|||.:||..|:|.||:||||||:||||||||||||.||||||.|...
BL03182___yhc    199 LLLHLAGSYLLNSISLLMMATMAFMISAVFRNSSLAVGISIFLLVMGGTV    248

BSNT_01538___    249 TAFIAAKFDWAKYILFANVDLTQYVDGTPLIKGMTMTFSLVMLAIYFIIF    298
                     |..:|.||.|||||||||.|||||.||:|::..||:.||:||||:|||:|
BL03182___yhc    249 TGLLATKFAWAKYILFANTDLTQYFDGSPVVSDMTLGFSIVMLAVYFIVF    298

BSNT_01538___    299 LLLAFGIFMKRDIAN    313
                     .:|||.:|.|||||:
BL03182___yhc    299 HVLAFVVFTKRDIAS    313


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.