Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01540 and BL03178

See DNA alignment / Visit BSNT_01540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01540___yhcJ.1.5803.seq
#    -bsequence pep-align/BL03178___yhcJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01540___yhcJ-BL03178___yhcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01540___yhcJ-BL03178___yhcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01540___yhcJ
# 2: BL03178___yhcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     123/279 (44.1%)
# Similarity:   183/279 (65.6%)
# Gaps:          10/279 ( 3.6%)
# Score: 607.5
# 
#
#=======================================

BSNT_01540___      1 MKKWLICSFVLVLLVSFTACSPSAEHESIKIGIAESDGAIWNYIAQKAEE     50
                     |||:......|:|......|:..::.::|||||:.:|..||:::.:|||:
BL03178___yhc      1 MKKFACVVIFLLLAAVIAGCAADSDAKTIKIGISGTDTRIWDFVKKKAEK     50

BSNT_01540___     51 AGLDIQLIPFSDYAESDIALANKEIDANAFQTISYFQSFTQKYKLNLAPL    100
                     .||.::::.:|||.:.:.|||:.:||||||||||||.:|.::..|.|:|:
BL03178___yhc     51 EGLKLEIVKYSDYVQPNQALASGDIDANAFQTISYFNAFKKERNLELSPV    100

BSNT_01540___    101 GTTYITPMGIYSKRYDRIRDIPRGAVVSVPDKAFDFGRALTVLQEAGLLT    150
                     |||.|.||||||::||...|||.||.::||.:|.:.||||.:|:.||||.
BL03178___yhc    101 GTTIIAPMGIYSEKYDSPGDIPNGAEIAVPSEATNMGRALLLLESAGLLQ    150

BSNT_01540___    151 LKNGFNGTGSVDMIKDNPRHLKLKAV-RQQDAVSGADV--FVMKPSEAKK    197
                     ||:||:|.|::|.||:||:.||:..| .:|.....|||  .|:....|..
BL03178___yhc    151 LKDGFDGNGTLDAIKENPKKLKITTVAAEQTPRVLADVAASVINNGIAVD    200

BSNT_01540___    198 AGLNPKKHTLKSGGPMSGEEMNLIVVRAEDQDREALQTILELYQADDTAA    247
                     ||.:|.|.::|.....:...:|:|..|.||:|||.|:.|:|||||||||.
BL03178___yhc    201 AGFHPVKDSIKLEDETATPYINIIAARTEDRDREDLKKIVELYQADDTAE    250

BSNT_01540___    248 FIEKEYQGDLVPAFLPLKRLSDWKNEFEH    276
                     .|:||:.|..:|.|:|||.:.:       
BL03178___yhc    251 LIKKEFDGAQLPTFVPLKDIGE-------    272


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