Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01583 and BL03175

See DNA alignment / Visit BSNT_01583 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:02
# Commandline: needle
#    -asequence pep-align/BSNT_01583.1.5803.seq
#    -bsequence pep-align/BL03175___yhcP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01583-BL03175___yhcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01583-BL03175___yhcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01583
# 2: BL03175___yhcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity:     122/355 (34.4%)
# Similarity:   186/355 (52.4%)
# Gaps:          76/355 (21.4%)
# Score: 632.5
# 
#
#=======================================

BSNT_01583         1 MRDGIGKRAASALFLCG------VLVMLAVSSAIVSSAMYILSFPGQASG     44
                                   :.|      ||:|....||::.:...:.|.....:.
BL03175___yhc      1 --------------MTGEMKAAFVLIMAGALSALLLAIFVVFSQESPEAA     36

BSNT_01583        45 I---TKEQVTKHMKKESFKQADIYYTSKEKSLLPLTKETLEYAVSINQIM     91
                     :   .||::.:.::...::...|||..|::.:|.||||||..|..:|:.:
BL03175___yhc     37 VLSGKKEKLKESLEMVKYESVSIYYAEKDRPILELTKETLRDAADMNREL     86

BSNT_01583        92 IGYSNQKPIDIIFFPNEKQMEAYSGLLDVVGFYSEREQLIGLLPEEKKKL    141
                     .....|..:|:|||.|...||::|.|.|:.||||...::|||||||:|.|
BL03175___yhc     87 FVSPLQDSVDLIFFSNRDDMESFSKLKDITGFYSNDMRMIGLLPEERKHL    136

BSNT_01583       142 LEGDEVAVYLYQRLLIHEYSHHAFHQKLKELETDPDEFPLWFHEGLSEWI    191
                     ..|:..||:||:|:|:|||:|:|||.||:||..||..:|||||||::||.
BL03175___yhc    137 NNGEGFAVFLYKRVLVHEYTHYAFHVKLRELNADPGTYPLWFHEGVAEWA    186

BSNT_01583       192 ANYELLIDPITFSVVPFDRLQTDRDWQEARAEYDTDVYLQSFYMIDELTD    241
                     :.:..:......||||..:|:|||.||:||..|:||:||||:|:|:||.:
BL03175___yhc    187 SAHAAIEIRTLPSVVPLSKLKTDRQWQKARTGYETDIYLQSYYLIEELAE    236

BSNT_01583       242 KYGKDIISEMIKETAKKGDFEKGFKSATKECLDQFEKDFKKKFEKNSAAL    291
                     |.|:.:|.::|:|||::|.|..|||:|..:.|..|||:||:|:|....||
BL03175___yhc    237 KKGRGVILDIIEETAERGSFADGFKAAVGQSLTGFEKEFKRKYEAKKTAL    286

BSNT_01583       292 ---------DSIYPMPLLLVKSLLTHSAIPTCVGGICPWAGANEFRSCSI    332
                              |.                                       
BL03175___yhc    287 KFHLQCRFHDQ---------------------------------------    297

BSNT_01583       333 SCASS    337
                          
BL03175___yhc    297 -----    297


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