Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01583 and BL03175
See
Amino acid alignment /
Visit
BSNT_01583 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01583.1.5803.seq
# -bsequence dna-align/BL03175___yhcP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01583-BL03175___yhcP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01583-BL03175___yhcP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01583
# 2: BL03175___yhcP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1157
# Identity: 570/1157 (49.3%)
# Similarity: 570/1157 (49.3%)
# Gaps: 406/1157 (35.1%)
# Score: 1321.5
#
#
#=======================================
BSNT_01583 1 -TTGCGGGATGGCATAGGAAAGC-------GT----------GCGGCATC 32
|..||| ||.|.|.|||||| || |||| .
BL03175___yhc 1 GTGACGG---GGGAGATGAAAGCAGCCTTTGTTTTAATCATGGCGG---G 44
BSNT_01583 33 CGCTCTATTCCTGTGCGGAGTCCTTGTGATGCTGGC-----------TGT 71
||||||||.| || || |||.|| |||| |||
BL03175___yhc 45 CGCTCTATCC----GC----TC--TGTTAT--TGGCCATTTTTGTCGTGT 82
BSNT_01583 72 AAGCTCAGCCATCGTATCA-AGCGCGATGTATATCCTGTCTTTTCCAGGT 120
||||||| | ||.|| ||||
BL03175___yhc 83 ----TCAGCCA-------AGAGAGC---------CCTG------------ 100
BSNT_01583 121 CAGGCATCTGGAAT------AACAAAAGAACAAGTGA------CGAAGCA 158
||||..|||...| ||.|||||||.||.||| ||..|.|
BL03175___yhc 101 -AGGCGGCTGTGCTTTCGGGAAAAAAAGAAAAACTGAAAGAATCGCTGGA 149
BSNT_01583 159 CATG-------AAGAAAGAGTCATTCAAACAGGCCGATATTTATTACACT 201
.||| |.|||||.|||| || |||||||||.||
BL03175___yhc 150 AATGGTCAAATATGAAAGTGTCA---------GC----ATTTATTACGCT 186
BSNT_01583 202 TCTAAGGAAA-----AGTCC--TTACTGCCATTGACGAAAGAAACGCTTG 244
|||| ||.|| || |||....||||.||.||.||||||.
BL03175___yhc 187 ------GAAAAAGATAGGCCGATT-CTGGAGCTGACAAAGGAGACGCTTC 229
BSNT_01583 245 AATATGCAGTCAG-TATTAATCAGATTATGATTGGATATTCGAATCAAAA 293
...||||.| |.| |||.||||.|....||.||| || |
BL03175___yhc 230 GGGATGCCG-CTGATATGAATCGGGAACTGTTTG----------TC---A 265
BSNT_01583 294 G-CCTATT---GACA---------TTAT-TTTTTTTCCTAATGAAAAAC- 328
| |||.|| |||| |.|| |||||||| ||||
BL03175___yhc 266 GTCCTCTTCAAGACAGCGTTGATTTGATCTTTTTTTC--------AAACC 307
BSNT_01583 329 ------AGATGGAGGCTTACTCCGGTTT----ATT---GGATGTAGTTGG 365
|.||||||.|.| ||| ||| ||||.||...||
BL03175___yhc 308 GCGATGATATGGAGTCAT-------TTTCAAAATTAAAGGATATAACCGG 350
BSNT_01583 366 TTTTTATTCTGAACG---GGAGCAGCTGATCGGATTGTTGCCTGAAGAGA 412
.|||||||| .|||| .||| |.|||||||..|.|||||.||.||||
BL03175___yhc 351 ATTTTATTC-AAACGATATGAG--GATGATCGGGCTTTTGCCCGAGGAGA 397
BSNT_01583 413 AAAAGAAACTGTTAGAAGGGGACGAGG---TAGCGGTTTATTTGTACCAG 459
..|||.|.||| .|.||.|| ||||| |.||.||.|...|||||.|.
BL03175___yhc 398 GGAAGCATCTG-AATAACGG--CGAGGGATTCGCCGTCTTCCTGTACAAA 444
BSNT_01583 460 AGATTGTTGATTCATGAATACTCGCACCATGCGTTTCACCAGAAATTGAA 509
.|..||.||.|.|||||.||..|.||..||||.||||||...||..|||.
BL03175___yhc 445 CGGGTGCTGGTGCATGAGTATACCCATTATGCTTTTCACGTCAAGCTGAG 494
BSNT_01583 510 GGAGCTTGAGACGGATCCCGATGAGTT-TCCGTTATGGTTTCATGAAGG- 557
.||.||..|..|.|| ||||...|.|| ||||.|.||||||||.|||||
BL03175___yhc 495 AGAACTGAATGCCGA-CCCGGGAACTTATCCGCTCTGGTTTCACGAAGGA 543
BSNT_01583 558 GTTAAGCGAGTGGATTGCGAACTATGAAT-------TGCTCAT------- 593
|| ||| ||||| |||||||
BL03175___yhc 544 GT--AGC-----------------TGAATGGGCTTCTGCTCATGCCGCGA 574
BSNT_01583 594 ---AGATCCGATCACGTT---TTCTGTCGTGCCCTT--------TGACCG 629
|.||||| .||.|| |||.|||||.||||| |||
BL03175___yhc 575 TAGAAATCCG--GACTTTGCCTTCAGTCGTCCCCTTGAGCAAGCTGA--- 619
BSNT_01583 630 TTTGCAGACTGATCGAGACTGGCAGGAAGCTAGAGCCGAATATGACACTG 679
||||.||.||..|.|||||..||||..|..|.|.||||||.||.|
BL03175___yhc 620 -----AGACCGACCGGCAATGGCAAAAAGCCCGGACTGGATATGAAACCG 664
BSNT_01583 680 ATGTCTATTTGCAAAGCTTTTATATGATCGATGAGCTGACGGACAAATAC 729
||.|.|||||||||||.|.||||.|||||||.|||||..||||.|||.|.
BL03175___yhc 665 ATATTTATTTGCAAAGTTATTATTTGATCGAAGAGCTTGCGGAGAAAAAA 714
BSNT_01583 730 GGGAAAGATATTAT-TTCAGAAATGATTAAGGAAACGGCAAAAAAAGGGG 778
||.|..|...|.|| .|| ||.||.||..|||||||||| ..|..||||
BL03175___yhc 715 GGAAGGGGCGTCATCCTC-GACATTATCGAGGAAACGGC--TGAGCGGGG 761
BSNT_01583 779 A--CTTTGAAAAAGGGTTTAA-------ATCAGCAACAAAGGAATGTC-T 818
| .||||.|.|.||.||||| .||.||.| ||| |
BL03175___yhc 762 AAGTTTTGCAGACGGATTTAAGGCCGCCGTCGGCCA---------GTCGT 802
BSNT_01583 819 TGATCA--ATTTGAAAAAGATTTTAAGAAAAAATTTGAA---AAAAACAG 863
||| || .|||||.|||||.|||||...|||||..||| |||||.|
BL03175___yhc 803 TGA-CAGGTTTTGAGAAAGAATTTAAACGAAAATACGAAGCGAAAAAAA- 850
BSNT_01583 864 TGCGGCATTGGATAGTATCTATC--CAATGCCTTTGTT----ATTAGTGA 907
||||.||| .|||.|| ||| |||||||.|| || ||.|.|||
BL03175___yhc 851 --CGGCGTTG--AAGTTTC-ATCTTCAATGCCGTT-TTCATGATCAATGA 894
BSNT_01583 908 AGTCCTTGCTGACCCATTCCGCCATTCCGACTTGTGTCGGAGGCATTTGT 957
BL03175___yhc 894 -------------------------------------------------- 894
BSNT_01583 958 CCTTGGGCAGGGGCGAATGAATTTCGCAGCTGTTCCATATCCTGCGCATC 1007
BL03175___yhc 894 -------------------------------------------------- 894
BSNT_01583 1008 AAGCTGA 1014
BL03175___yhc 894 ------- 894
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.