Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01589 and BL03171

See DNA alignment / Visit BSNT_01589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_01589___yhcU.1.5803.seq
#    -bsequence pep-align/BL03171___yhcU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01589___yhcU-BL03171___yhcU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01589___yhcU-BL03171___yhcU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01589___yhcU
# 2: BL03171___yhcU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      58/133 (43.6%)
# Similarity:    76/133 (57.1%)
# Gaps:          16/133 (12.0%)
# Score: 270.5
# 
#
#=======================================

BSNT_01589___      1 MARKVIDVRIVNAATAEQESFIKELSMELIHDVFPLYFSELDIQRFKKKG     50
                            :|||.|||.|||.:|:||..|| :.:||||.::..|:..||:|
BL03171___yhc      1 -------MRIVKAATEEQEIYIEELVSEL-YQIFPLYLNKQKIKELKKQG     42

BSNT_01589___     51 VLSLNNHYYQGTLKEAFQIMACLQMIHIILTKPSPHSDLSDQAIFEKNSK    100
                     .|.|....|:|||.||||||..||:||.:|||......|.|:.:|:|||:
BL03171___yhc     43 ALQLKEDEYKGTLDEAFQIMTSLQLIHALLTKAKRKWVLKDRDLFDKNSR     92

BSNT_01589___    101 MLNDFGIYFPFAFSDFQ--KKTNKAFFGQRRLI    131
                     .|||.|:|||...:||.  ...||...      
BL03171___yhc     93 KLNDCGLYFPLTSADFHIVNTENKMLM------    119


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