Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01581 and BL03161

See DNA alignment / Visit BSNT_01581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:02
# Commandline: needle
#    -asequence pep-align/BSNT_01581___yhcM.1.5803.seq
#    -bsequence pep-align/BL03161.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01581___yhcM-BL03161.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01581___yhcM-BL03161.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01581___yhcM
# 2: BL03161
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:      40/150 (26.7%)
# Similarity:    61/150 (40.7%)
# Gaps:          39/150 (26.0%)
# Score: 152.0
# 
#
#=======================================

BSNT_01581___      1 MLFNQRRGISPTALIIGSTMLIAALSPQIRHRISG-FITGQMNRRNSENN     49
                      :|.:|.||.|..|::||..|.||.||:||.|::| |..|...|:.....
BL03161            1 -MFRRRSGIHPAVLVLGSAALTAAFSPEIRKRLTGMFANGMRGRQQGSGR     49

BSNT_01581___     50 TFDASNVGNIVKQAFSGGSGDNQDRSQNQSQRQNGRQHQHAGQQQPQHQH     99
                     .....|..:::||||:.|                |:.|:|.     |..|
BL03161           50 NQTMMNPADMIKQAFNPG----------------GQSHEHR-----QSGH     78

BSNT_01581___    100 TQSQTRQTETAAKKRQPHYAEPIHFEQSAMNVMDDNTMMEMLEDLEPGR-    148
                     |.:...|:.        |...|:       |||:|....:.:.|.:... 
BL03161           79 TANDQHQSS--------HMTAPV-------NVMNDQAAAQTMFDDDQSYS    113


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