Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01587 and BL03158

See DNA alignment / Visit BSNT_01587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_01587___yhcT.1.5803.seq
#    -bsequence pep-align/BL03158___yhcT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01587___yhcT-BL03158___yhcT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01587___yhcT-BL03158___yhcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01587___yhcT
# 2: BL03158___yhcT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     180/305 (59.0%)
# Similarity:   234/305 (76.7%)
# Gaps:           3/305 ( 1.0%)
# Score: 976.0
# 
#
#=======================================

BSNT_01587___      1 MNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHE     50
                     ||||..||....:.:..|:.|::.||...||||||||.|::::::||||:
BL03158___yhc      1 MNQKNHGLFFSADIRHHGELLYAYLKREAKASKPVIQYWIANEKVKVNHK     50

BSNT_01587___     51 SVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAG    100
                     ||.:|:.::.||.|.|||:|.|.|.::||||||.:||||:||||:|||||
BL03158___yhc     51 SVNHNVRLESGDSVMIDLREEEESGIVPEYGELPVLFEDDHMLIVNKPAG    100

BSNT_01587___    101 IATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKH    150
                     :||||||.||||||:||:|:::|:|||..|||||||||:|||||:|||||
BL03158___yhc    101 MATHPNEAGQTGTLSNLVAFYFQMNGEERKVRHVHRLDKDTSGAVVFAKH    150

BSNT_01587___    151 RLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRR    200
                     |||||:||:||::|.|.|||.|:||||.|.|.|||::|||||:.||.|||
BL03158___yhc    151 RLAHALLDEQLQRKELARTYVAVAEGKFRKKTGTISAPIGRDKHHPVRRR    200

BSNT_01587___    201 VSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHPLT    250
                     ||..||.|||||:....:::..::|..|:|||||||||||||||:||||:
BL03158___yhc    201 VSHSGQPAVTHFESKGYDSRHDVTLCRLQLETGRTHQIRVHLASIGHPLS    250

BSNT_01587___    251 GDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTY    300
                     ||:||||...|..||||||.::...||||.|.:...||.|.|:|:.....
BL03158___yhc    251 GDTLYGGSKGLFQRQALHAIEINVTHPITKERVTVAAPLPDDLKDEIGRL    300

BSNT_01587___    301 FS---    302
                     |.   
BL03158___yhc    301 FGTVD    305


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