Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03731 and BL03157

See DNA alignment / Visit BSNT_03731 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_03731___pstS.1.5803.seq
#    -bsequence pep-align/BL03157___pstS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03731___pstS-BL03157___pstS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03731___pstS-BL03157___pstS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03731___pstS
# 2: BL03157___pstS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     242/309 (78.3%)
# Similarity:   267/309 (86.4%)
# Gaps:          13/309 ( 4.2%)
# Score: 1214.0
# 
#
#=======================================

BSNT_03731___      1 MKK-NKLVLMLLMAAFMMIAAACG------NAGESKKSNSDSAKGEEKAS     43
                     ||. .|:.||.:|:..::.|||||      ||.|.|:|:    |.|.|||
BL03157___pst      1 MKPFKKITLMFIMSVLVVFAAACGSSSTNNNADEGKQSD----KTENKAS     46

BSNT_03731___     44 GSLTISGSSAMQPLVLAAAEKFMEENPDADIQVQAGGSGTGLSQVSEGAV     93
                     |||||||||||||||||||||||:|||||||||||||||||||||:||.|
BL03157___pst     47 GSLTISGSSAMQPLVLAAAEKFMDENPDADIQVQAGGSGTGLSQVAEGTV     96

BSNT_03731___     94 QIGNSDVFAEEKEGIDAKALVDHQVAVVGMAAAVNPDAGVKDISKDELKK    143
                     |||||||||||||||.||.|.|||||||||||||||:.|:.|||.::|||
BL03157___pst     97 QIGNSDVFAEEKEGIPAKELTDHQVAVVGMAAAVNPEVGIDDISLEDLKK    146

BSNT_03731___    144 IFTGKIKNWKELGGKDQKITLVNRPDSSGTRATFVKYALDGEEPAEGITE    193
                     :|||||||||||||||||||||||||||||||||||||||||.|||||||
BL03157___pst    147 VFTGKIKNWKELGGKDQKITLVNRPDSSGTRATFVKYALDGETPAEGITE    196

BSNT_03731___    194 DSSNTVKKIIADTPGAIGYLAFSYLTDDKVTALSIDGVKPEAKNVATGEY    243
                     ||||||||:||:||||||||||||:.||.||.||||||||.|:||..|::
BL03157___pst    197 DSSNTVKKLIAETPGAIGYLAFSYIKDDTVTPLSIDGVKPTAENVQKGKF    246

BSNT_03731___    244 PIWAYQHSYTKGEATGLAKEFLDYLKSEDIQKSIVTDQGYIPVTDMKVTR    293
                     |||||||||||||..||||||||||.|:||||||||:|||||||||:|.|
BL03157___pst    247 PIWAYQHSYTKGEPEGLAKEFLDYLMSDDIQKSIVTEQGYIPVTDMEVKR    296

BSNT_03731___    294 DANGKQS--    300
                     ||:|||:  
BL03157___pst    297 DADGKQTDK    305


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