Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03731 and BL03157
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03731___pstS.1.5803.seq
# -bsequence dna-align/BL03157___pstS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03731___pstS-BL03157___pstS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03731___pstS-BL03157___pstS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03731___pstS
# 2: BL03157___pstS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity: 683/945 (72.3%)
# Similarity: 683/945 (72.3%)
# Gaps: 69/945 ( 7.3%)
# Score: 2445.5
#
#
#=======================================
BSNT_03731___ 1 ---------ATGAAAAAAAACAAATTGGTGCTTATGCTTC-TGATGGCTG 40
.|.|||||||.||.|.||.|| ||| |.||| |.
BL03157___pst 1 GTGAAACCATTTAAAAAAATCACACTGATG-------TTCATCATG--TC 41
BSNT_03731___ 41 CATTTATGATG--ATTGCAGCTGCATGCGGA------------------A 70
|.|||..|.|| .|.|||||.||.||.||| |
BL03157___pst 42 CGTTTTAGTTGTCTTCGCAGCAGCTTGTGGAAGCAGCAGTACAAACAACA 91
BSNT_03731___ 71 ATGCAGGAGAAAGTAAAAAATCGAATAGCGATTCTGCAAAA-GGAGAAGA 119
||||||..|||.|.|||.|| |||||| |||| .|||| |
BL03157___pst 92 ATGCAGACGAAGGCAAACAA------AGCGAT-----AAAACAGAGA--A 128
BSNT_03731___ 120 AAAGGCATCAGGTTCTTTAACCATTTCTGGTTCATCGGCAATGCAGCCAC 169
.|||||.|||||||||||.||.|||||.|||||.|||||.||||||||.|
BL03157___pst 129 TAAGGCTTCAGGTTCTTTGACGATTTCGGGTTCTTCGGCGATGCAGCCTC 178
BSNT_03731___ 170 TAGTACTT-GCAGCCGCGGAAAAATTTATGGAAGAAAACCCTGATGCTGA 218
|.|| ||| |||||.||.||||||||.|||||.|||||.||||||||.||
BL03157___pst 179 TTGT-CTTAGCAGCGGCTGAAAAATTCATGGATGAAAATCCTGATGCCGA 227
BSNT_03731___ 219 TATACAGGTACAAGCTGGCGGTTCTGGAACAGGGCTTTCTCAAGTCTCTG 268
|||.||.||.||.|||||.||||||||.|||||.|||||.|||||..|||
BL03157___pst 228 TATTCAAGTTCAGGCTGGAGGTTCTGGTACAGGCCTTTCCCAAGTGGCTG 277
BSNT_03731___ 269 AAGGAGCTGTTCAGATCGGGAATTCAGACGTTTTTGCAGAAGAAAAAGAA 318
||||..|.||.||.|||||.||.||.||.||.|||||.||||||||||||
BL03157___pst 278 AAGGCACAGTCCAAATCGGAAACTCCGATGTCTTTGCCGAAGAAAAAGAA 327
BSNT_03731___ 319 GGCATCGATGCAAAAGCGCTTGTCGATCATCAAGTCGCTGTAGTTGGTAT 368
|||||...|||.||||..|||..||||||||||||.||.||.||.||.||
BL03157___pst 328 GGCATTCCTGCCAAAGAACTTACCGATCATCAAGTTGCGGTTGTCGGAAT 377
BSNT_03731___ 369 GGCAGCAGCTGTAAACCCTGATGCTGGTGTGAAGGATATTTCAAAAGATG 418
||||||.||.||.||||||||.|..||..|..|.||.|||||...|||.|
BL03157___pst 378 GGCAGCTGCCGTTAACCCTGAAGTAGGCATCGATGACATTTCGTTAGAAG 427
BSNT_03731___ 419 AATTGAAAAAAATCTTCACTGGCAAAATTAAAAACTGGAAAGAGCTCGGC 468
|..|.|||||..|.|||||.||.|||||.||||||||||||||.||.|||
BL03157___pst 428 ATCTCAAAAAGGTATTCACAGGTAAAATCAAAAACTGGAAAGAACTAGGC 477
BSNT_03731___ 469 GGCAAAGACCAAAAGATTACACTTGTAAACCGTCCTGATTCTTCTGGCAC 518
||.|||||.||||||||.||.|||||.|||||||||||||||||.||.||
BL03157___pst 478 GGGAAAGATCAAAAGATCACCCTTGTCAACCGTCCTGATTCTTCAGGAAC 527
BSNT_03731___ 519 ACGTGCTACATTTGTGAAATATGCGCTTGACGGAGAAGA-ACCTGCAGAA 567
.||.||.||.|||||.||||||||.|||||.|||| ||| .||.||.|||
BL03157___pst 528 CCGCGCGACTTTTGTCAAATATGCACTTGATGGAG-AGACTCCAGCTGAA 576
BSNT_03731___ 568 GGCATTACTGAAGATTCCTCCAACACGGTGAAAAAAATCATTGCTGATAC 617
||.||.||.||||||||.||.|||||.||||||||..|.||.|||||.||
BL03157___pst 577 GGAATCACGGAAGATTCTTCAAACACAGTGAAAAAGTTAATCGCTGAAAC 626
BSNT_03731___ 618 TCCGGGAGCGATTGGATATCTTGCATTCTCATATTTAACAGATGACAAAG 667
.||.||.||.||.|||||||||||.|||||.|||.|.|..|||||.|..|
BL03157___pst 627 GCCTGGTGCAATCGGATATCTTGCGTTCTCGTATATCAAGGATGATACTG 676
BSNT_03731___ 668 TAACTGCTCTATCTATTGACGGTGTTAAACCTGA-AGCGAAAAATGTAGC 716
|.|||.|.||.||.||.|||||.|||||.|| || |||..||||||||..
BL03157___pst 677 TCACTCCGCTTTCAATCGACGGCGTTAAGCC-GACAGCCGAAAATGTACA 725
BSNT_03731___ 717 AACTGGCGAGTATCCGATCTGGGCTTATCAGCATTCTTATACAAAAGGTG 766
||..|||.|.|..||||||||||||||.||||||||||||||.|||||.|
BL03157___pst 726 AAAAGGCAAATTCCCGATCTGGGCTTACCAGCATTCTTATACGAAAGGCG 775
BSNT_03731___ 767 AAGC-GACAGGTTTAGCTAAAGAATTTCTTGATTATCTAAAGAGTGAAGA 815
||.| || |||.||.||.||||||||.||.||.|||.|.|.|||.||.||
BL03157___pst 776 AACCTGA-AGGCTTGGCGAAAGAATTCCTCGACTATTTGATGAGCGATGA 824
BSNT_03731___ 816 CATTCAAAAAAGCATTGTTACTGACCAAGGCTACATTCCGGTTACTGATA 865
||||||||||..|||.||.||.||.||.|||||||||||.||.||.||.|
BL03157___pst 825 CATTCAAAAATCCATCGTGACGGAGCAGGGCTACATTCCAGTAACAGACA 874
BSNT_03731___ 866 TGAAAGTGACACGCGATGCCAACGGGAAGCAAAGCTGA------- 903
||.||||.|.||||||.||..|.||.||||||| ||||
BL03157___pst 875 TGGAAGTAAAACGCGACGCGGATGGAAAGCAAA-CTGATAAATAA 918
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