Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03111 and BL03140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence pep-align/BSNT_03111___yobW.1.5803.seq
# -bsequence pep-align/BL03140___csk22.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03111___yobW-BL03140___csk22.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03111___yobW-BL03140___csk22.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03111___yobW
# 2: BL03140___csk22
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 77/184 (41.8%)
# Similarity: 106/184 (57.6%)
# Gaps: 22/184 (12.0%)
# Score: 352.5
#
#
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BSNT_03111___ 1 MHLTLQSVYPAMIIIFFLYKKIKRSIGYQPLKPRWLFTRIILFS-LFAFG 49
....||:..:|.|.|||:|||||||..:..|||||| :|.|.
BL03140___csk 1 --------MQFFIIVSIVYIKFKRSVGYQPLKPARMLFRIILFSGIFVFL 42
BSNT_03111___ 50 LSIFSAIHPFLYGYLILGILGGWLLVFFAKKNISFEKRRGKIYFRTHIWV 99
|:: ||:||..|.|.::||..|.:|..:|.|::|.|.|.|.:|||||:||
BL03140___csk 43 LTM-SALHPLSYFYDLIGIALGLILTVYALKHVSIENRGGVLYFRTHLWV 91
BSNT_03111___ 100 EVILLTLFLSRFLYRVTELYLTSPDLNSLGS--YSQSIGTDPLTIGVCFL 147
|:|:|.|||.|||||:.|:......::..|| |......||.|:...|:
BL03140___csk 92 ELIVLFLFLYRFLYRIAEIGQLQTAVSDGGSAAYGALFAQDPATMIGFFV 141
BSNT_03111___ 148 IAVYYIGFSSFVIKLSRNELEQHEYNKEKDILAR 181
:||||:|||.||:|..|.|.::..
BL03140___csk 142 LAVYYVGFSFFVLKKGRTEEKRSA---------- 165
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