Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02943 and BL03135

See DNA alignment / Visit BSNT_02943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02943___yndG.1.5803.seq
#    -bsequence pep-align/BL03135.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02943___yndG-BL03135.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02943___yndG-BL03135.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02943___yndG
# 2: BL03135
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     139/305 (45.6%)
# Similarity:   191/305 (62.6%)
# Gaps:          43/305 (14.1%)
# Score: 669.5
# 
#
#=======================================

BSNT_02943___      1 MRQKPIYVEIEMKSDLDTLWEYTQNPSLHKEWDLRFSNITYLNSQPCEKQ     50
                     |::.||||||.::::::.||.|||:|:||::|||||::||||..:|.|.|
BL03135            1 MKKTPIYVEISIQAEMERLWRYTQDPTLHRQWDLRFTDITYLKRRPGEPQ     50

BSNT_02943___     51 KFLYETRVGFGLKVSGTGETVRVFNKCSSERSSSLAFGSDHPLSLIRHGS    100
                     :||||||:|||||:|||||:.....:.:.:|.|||.|.::||||:||.|.
BL03135           51 RFLYETRIGFGLKISGTGESAGNVFQDTGDRVSSLKFATNHPLSVIREGR    100

BSNT_02943___    101 GYWKYIQRENGKMTFLTQYQYKTAYGLLGRWIDRLLFRPLLGWATAWSFD    150
                     |||||.:.|.| :||:|||.|.|.||.|||..| :.||||||||||||||
BL03135          101 GYWKYSESETG-ITFMTQYDYDTRYGRLGRLAD-MAFRPLLGWATAWSFD    148

BSNT_02943___    151 ALRLWVEQNKHPKRFIRSAIIYVFMCLFFSLFWFYQG-------------    187
                     ||::|:|:..||:...:..::|..:||.||..|.|||             
BL03135          149 ALKIWLEKGLHPRLLFQKTLVYWLVCLLFSFVWIYQGLVPKLIMAHPGEI    198

BSNT_02943___    188 -----FAG----VETSI-LAGTAEIGLAILWLLPL-KRKW-IIHGVQACI    225
                          |.|    .||.: |.|.||:.:.:|||.|: |||| ::|.|...:
BL03135          199 SMLSAFTGGRFHPETLLRLIGLAEVMVGVLWLYPVRKRKWFLLHIVLLVL    248

BSNT_02943___    226 F---AGFACLGS--EIF-------MWILLSVFSAASGALSLQLPSARRTK    263
                     .   ||.|.:.|  |.|       ..|:|||....|   :..:|:|..|.
BL03135          249 LSASAGMADIASFAEPFNPVVLNAALIILSVIGYVS---ACGIPNAGNTI    295

BSNT_02943___    264 RKRKK    268
                     |||: 
BL03135          296 RKRR-    299


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