Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03106 and BL03134
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_03106___yobS.1.5803.seq
# -bsequence pep-align/BL03134.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03106___yobS-BL03134.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03106___yobS-BL03134.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03106___yobS
# 2: BL03134
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 85/193 (44.0%)
# Similarity: 128/193 (66.3%)
# Gaps: 5/193 ( 2.6%)
# Score: 425.5
#
#
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BSNT_03106___ 1 MSPRIGLTQKMIIDAAAEIADQEGVNGVSLAALSKKMNVRPPSLYNHING 50
|||||||.:..:::|||.:||:||::.|:||:|||::||:.|||||||.|
BL03134 1 MSPRIGLNKDAVLEAAAALADEEGIHEVTLASLSKRLNVKSPSLYNHIKG 50
BSNT_03106___ 51 LQAIRAELAVRGLTKLFDQMADSVTERKGDSAMLSLAHAYVDFAIENPGY 100
|..:|.|||:.|||.|::.||.::...:.|.|:..:||||:.||...||.
BL03134 51 LNDLRKELALYGLTILYENMASAIQRAEEDQAVSQMAHAYLAFAKNRPGL 100
BSNT_03106___ 101 YEAALLKV--QDKRMEIVSDQIVCLVTKLLIENGYASEKTAIHATRGLRS 148
|||..:.: :|.|::...|:::.||..:| ::.:..::.||||.|||||
BL03134 101 YEATFIAMPDEDGRLDEAGDRVLALVLSVL-KDYHLDDEAAIHAVRGLRS 149
BSNT_03106___ 149 LLHGFTVLIAKEAFEREEDILESLSFSIRTFLSGLLINNKNIM 191
:||||..|...:||....|:.|||..:||.||.|:.:....
BL03134 150 ILHGFAALRQHDAFGLPYDVEESLDLTIRVFLKGIAVYQTE-- 190
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