Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03107 and BL03133

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_03107___yobT.1.5803.seq
#    -bsequence pep-align/BL03133.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03107___yobT-BL03133.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03107___yobT-BL03133.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03107___yobT
# 2: BL03133
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     128/238 (53.8%)
# Similarity:   173/238 (72.7%)
# Gaps:           6/238 ( 2.5%)
# Score: 671.0
# 
#
#=======================================

BSNT_03107___      1 MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAV     50
                     ||:|::::|:||||||.:|||||||.:||:.:||||..:|.|..||::|.
BL03133            1 MRMTRFESVYQLTFFPHIFPVNCYLADEEDGLTLIDTGIPISKTGILKAA     50

BSNT_03107___     51 NQLGKPLQHILLTHAHGDHVGSLDTLAQTFPHAKVMISERDSFLLQGDTS    100
                     :.|.||::.|||||||.|||||||.|..:.|..||.|||||:.||:|||.
BL03133           51 DHLRKPIKRILLTHAHSDHVGSLDALYHSLPGVKVSISERDARLLKGDTK    100

BSNT_03107___    101 LRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSF    150
                     :.:.| :..||||:||:|:|.|...|..|:.|||||.:.:|||||||:||
BL03133          101 MLEGE-RGIIKGGVPKNIKTNPDIFLKEGDRIGSLLTVSSPGHTPGSISF    149

BSNT_03107___    151 LDTRNGTLIAGDAFQLRGGIAVSGQIKWTFPFPAFATWNKEEAIKSAQLL    200
                     .|.|:|.||.|||:..|.|:.|||.:|.:|||||.|||:||.|::|||.|
BL03133          150 FDERSGLLIVGDAYHTRSGMTVSGHLKLSFPFPALATWDKEIALESAQKL    199

BSNT_03107___    201 ADKAPSCLAVGHGNFLRSPAERMRQAIQKA-----KKG    233
                     .|..|..||.|||:.:..||:.|::|:.:|     :||
BL03133          200 LDLKPKALAAGHGDLVHDPAQAMKKAVNEAYIKLNRKG    237


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