Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03108 and BL03132

See DNA alignment / Visit BSNT_03108 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_03108___yobU.1.5803.seq
#    -bsequence pep-align/BL03132.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03108___yobU-BL03132.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03108___yobU-BL03132.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03108___yobU
# 2: BL03132
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:      76/169 (45.0%)
# Similarity:   102/169 (60.4%)
# Gaps:          21/169 (12.4%)
# Score: 370.0
# 
#
#=======================================

BSNT_03108___      1 MGFSHITHLDRKRFAGLSQRTSNALEMTEERRIPALWDQF-------WKQ     43
                     |.|||......|.|:|:|..|||..|.||:.:||::|..:       .:|
BL03132            1 MSFSHFEKQKAKLFSGVSTVTSNQNEATEKGKIPSMWSLYRERFPHKERQ     50

BSNT_03108___     44 DMSALLSQAEKDKSIIALYSNYEQETNGFYTFSVGTFQEYDDILPGPYEN     93
                     ||.         :..|||||:||.|..|.||||:|||.:..:.....   
BL03132           51 DMK---------RDTIALYSDYESEEYGAYTFSIGTFADQHEKAANV---     88

BSNT_03108___     94 IDLPASAYAVFTSRIGPIEEIVLETWKEIWTWDKRHLRTFTGDFEMYDQS    143
                     |.||||.||||.||.|.|||:|.|||:|||||.:::|||:|||:|:|.:.
BL03132           89 ISLPASEYAVFVSRRGRIEEVVFETWQEIWTWAEKNLRTYTGDYEVYGEQ    138

BSNT_03108___    144 AAVPQRAQVNIYVAIKK--    160
                     |..|:.|||.||:|:.:  
BL03132          139 AVNPENAQVAIYIAVDRKK    157


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