Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03110 and BL03130

See DNA alignment / Visit BSNT_03110 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_03110.1.5803.seq
#    -bsequence pep-align/BL03130.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03110-BL03130.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03110-BL03130.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03110
# 2: BL03130
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity:     165/374 (44.1%)
# Similarity:   221/374 (59.1%)
# Gaps:          66/374 (17.6%)
# Score: 860.0
# 
#
#=======================================

BSNT_03110         1 MLIRSEIVAEINTEHKKEGETPVFIAYARCIPPHNRYAQALSKCYDCFCW     50
                                                                       
BL03130            0 --------------------------------------------------      0

BSNT_03110        51 KIQEEKVRRMKLERLLAMVVLLISKKQVQAAELAELFEVSVRTIYRDIET    100
                              ||::||||:|:|||:|:||||.|||.:|||||||||||||.
BL03130            1 ---------MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEA     41

BSNT_03110       101 INRAGIPIVTSQGSGGGIGIMETYRLEREWLKEEELFAIASALQSVSSMY    150
                     ||:||||||||||:||||.|||.:|||.:.|..:||.||.:||:||||.|
BL03130           42 INQAGIPIVTSQGAGGGISIMERFRLENKLLSADELAAITTALESVSSTY     91

BSNT_03110       151 EPISHSTAYQKIKHLIPEQSAQAFKHQTEKWFIDMTAWGHTEDQKALREK    200
                     |.:.|.:|.:||:.|:.|:....|:.:|||||:|:::||   :...::||
BL03130           92 EVLHHGSALEKIRFLVSEEEMPEFRKKTEKWFVDISSWG---ESPVIKEK    138

BSNT_03110       201 I---SAAIDRLSTISFTYTSASGETLLRETEPYTLVCKAGHWYLYAYCLV    247
                     |   ..|.|....:||.|....|:|..|:.||:|||.|..||||||:||.
BL03130          139 IRLLDEASDSTRAVSFNYVDREGQTGKRKAEPHTLVLKGRHWYLYAFCLK    188

BSNT_03110       248 RNDFRFFKLNRMKDLAILHQTFIRKDIQLDTLPWDRNWYQKGRLTELVIL    297
                     |..||||||.||||:.:|.:.|.||::.|.:|||:.:||:...:||:.:|
BL03130          189 RQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLL    238

BSNT_03110       298 VQPAARQRIGEWFGYDVLHCEEDEICRAVISLPEDQWLIGFLLQFGKDIE    347
                     ::|:......||||.:.|..|..: |.|.||.||||||.|||||||..||
BL03130          239 IKPSGESLAREWFGSEALTYENGQ-CVATISYPEDQWLYGFLLQFGTHIE    287

BSNT_03110       348 VLQPLHIRDRVKETIHHMQKIYET    371
                     ||.|..||.::|:....:..:|||
BL03130          288 VLDPPRIRQKIKDLAKQIVHLYET    311


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