Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05790 and BL03106

See DNA alignment / Visit BSNT_05790 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence pep-align/BSNT_05790___spsJ.1.5803.seq
#    -bsequence pep-align/BL03106.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05790___spsJ-BL03106.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05790___spsJ-BL03106.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05790___spsJ
# 2: BL03106
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:      96/340 (28.2%)
# Similarity:   152/340 (44.7%)
# Gaps:          41/340 (12.1%)
# Score: 295.0
# 
#
#=======================================

BSNT_05790___      1 -------MAKSYLITGGAGFIGLTFT-KLMLRETDARITVLDKLT-----     37
                            ..:...|||||||||.:.. ||:.|.:   :||.|..:     
BL03106            1 MSDMTELSGQHIFITGGAGFIGSSLIGKLIERNS---VTVYDNFSRDSLR     47

BSNT_05790___     38 ---YASHPEEMEKLKQNSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAE     84
                        |..||          ..:.::|||.....:.:|. :....::|.|..
BL03106           48 YKPYRDHP----------HLKVLQGDILDLNALKKAI-QGASHIVHAAGI     86

BSNT_05790___     85 SHVDRSISQAEPFITTNVMGTYRLAEAVL-KGKAKKLIHISTDEVYGDL-    132
                     :.:|..|......:..|::|:..|.||.. ..:.|:::..||.||:|.: 
BL03106           87 AGIDTVIQNPVKTMQVNMIGSANLLEAAAGLTECKRVVCFSTSEVFGQIA    136

BSNT_05790___    133 -KADDPAFTETTPLSPNN-PYSASKASSDLLVLSYVKTHKLPAIITRCSN    180
                      :|.:.:.|....:.... .|:.||.:.:.:..:|.|...||.:..|..|
BL03106          137 FRARETSHTVLGAVGEARWTYAVSKLAEEHMAYAYFKELGLPTVTVRPFN    186

BSNT_05790___    181 NYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAI-KL    229
                     .|||.|..|..|.|::..|....|:.::|||.|||.|.:.:|....| :.
BL03106          187 VYGPEQVGEGAIKTMVHRALLDEPIYIHGDGTQIRAWCYVDDMIDGILRC    236

BSNT_05790___    230 ILEKGTDGEVYNIGGGNER---TNKELASVILKHLGCEELFAHVEDRKGH    276
                     :..|...||.:||  ||||   |...|||.|::.||.:......|.::..
BL03106          237 LTMKEAIGESFNI--GNERTVITVYGLASTIIRVLGSKSQIFFGEKKEAD    284

BSNT_05790___    277 DRRYAINASKLKNELGWRQEVTFEEGIARTIQWYTDN-DR    315
                     ........:|.|..||:..:|..||||.||.:....| |:
BL03106          285 IELRIPQVNKAKEMLGFSAKVDLEEGIRRTAESIKKNLDQ    324


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