Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01327 and BL03086

See DNA alignment / Visit BSNT_01327 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence pep-align/BSNT_01327___yfkD.1.5803.seq
#    -bsequence pep-align/BL03086___yfkD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01327___yfkD-BL03086___yfkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01327___yfkD-BL03086___yfkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01327___yfkD
# 2: BL03086___yfkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     204/264 (77.3%)
# Similarity:   230/264 (87.1%)
# Gaps:           1/264 ( 0.4%)
# Score: 1073.0
# 
#
#=======================================

BSNT_01327___      1 MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQ     50
                      ||||...||...|.||||.||...|.|..|:|:||.:||||||||||||
BL03086___yfk      1 -MKKLLCFTLTAFLSFSFFAVQEADAAKPIKIPSSVTNISKENTYPNASQ     49

BSNT_01327___     51 DQPMLQPSKLAKELLDHSEVKIENPHLIKMLNESNISGTPLAVGYRATIF    100
                     |||.||||:||:|||..:::.|||||||||||||:|||||||:||||||:
BL03086___yfk     50 DQPRLQPSELAEELLKTTDIAIENPHLIKMLNESSISGTPLAIGYRATIY     99

BSNT_01327___    101 LGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKG    150
                     ||:|||||.||||||||||:||||||.||||||..||:.|:|||..::||
BL03086___yfk    100 LGRWALGYTSNETVANWEYRKINTNRFDNRGGKAPAELTYSQEQTSKIKG    149

BSNT_01327___    151 GLTAKVPNAEDVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKK    200
                     |||||||.|||||:|||.|||:||.||||||||:|:||||||||||.|||
BL03086___yfk    150 GLTAKVPKAEDVKNMMMLKAMEKTKLPLAFETVVGSGTKRDQIYKVQPKK    199

BSNT_01327___    201 IGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTSQGIGAWIPVQ    250
                     :|.||||||||||||||||||||:|||||||||||||:||||||||||||
BL03086___yfk    200 LGNLHAYAPAVNEKGKVTYGEVYIVLKGNKRKLVVKNITSQGIGAWIPVQ    249

BSNT_01327___    251 DHVTFGFQLSSLPR    264
                     ||:|||||||..|:
BL03086___yfk    250 DHLTFGFQLSHQPK    263


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