Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01322 and BL03083

See DNA alignment / Visit BSNT_01322 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_01322___yfkH.1.5803.seq
#    -bsequence pep-align/BL03083___yfkH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01322___yfkH-BL03083___yfkH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01322___yfkH-BL03083___yfkH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01322___yfkH
# 2: BL03083___yfkH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 275
# Identity:     202/275 (73.5%)
# Similarity:   236/275 (85.8%)
# Gaps:           4/275 ( 1.5%)
# Score: 1045.5
# 
#
#=======================================

BSNT_01322___      1 MSFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLSTD     50
                     |||||||..|:.||||.|||||||||||||||||:||:|||..|||:.|.
BL03083___yfk      1 MSFLKELGWRFFLHEGPSKSAELAYFFLLSLFPFMIFLLTLIGYLPVKTG     50

BSNT_01322___     51 DVLGVIEQYAPASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMN    100
                     ||:|:||||||...||::|    :|||..|.|||||||||||||||||:|
BL03083___yfk     51 DVIGLIEQYAPEDTMSVIE----ETLNTGNRGLLSFGIIAALWSASNGLN     96

BSNT_01322___    101 AIVRSLNHAYDVEENRSFIIVRLTSIFLTIAMVFTILVALLLPVFGREIG    150
                     ||||:.||||:||||||||:|||||:.||.|||||||||||||||||.||
BL03083___yfk     97 AIVRAFNHAYEVEENRSFIMVRLTSLLLTAAMVFTILVALLLPVFGRAIG    146

BSNT_01322___    151 RLASDFVGASDLFLSVWAAIRWGVSPLVLLIVFSALYVIAPNKKLSLRFV    200
                     ...::..|..::||:.|:|:|||:|||||||||:|||..||||:||.:||
BL03083___yfk    147 HFIANLDGTPEMFLTAWSALRWGISPLVLLIVFTALYFFAPNKRLSFKFV    196

BSNT_01322___    201 MPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGIIVLMIWFYLSGI    250
                     :||||.||.|||:||.|||:|||.||||||||||:||||||||||||||:
BL03083___yfk    197 LPGAVAATAGWILVSVLFSYYVSEFANYSATYGSLGGIIVLMIWFYLSGM    246

BSNT_01322___    251 LIILGGEINALLHKRKKLPDENPYH    275
                     :|||||||||||||||.:|:|||.:
BL03083___yfk    247 MIILGGEINALLHKRKIIPEENPRN    271


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.