Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01322 and BL03083

See Amino acid alignment / Visit BSNT_01322 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence dna-align/BSNT_01322___yfkH.1.5803.seq
#    -bsequence dna-align/BL03083___yfkH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01322___yfkH-BL03083___yfkH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01322___yfkH-BL03083___yfkH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01322___yfkH
# 2: BL03083___yfkH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     585/873 (67.0%)
# Similarity:   585/873 (67.0%)
# Gaps:         102/873 (11.7%)
# Score: 1982.5
# 
#
#=======================================

BSNT_01322___      1 ATGAGTTTTTTGAAAGAGC------------TTTTCAGCAGATACACCCT     38
                     |||||||||||||||||||            ||||            |||
BL03083___yfk      1 ATGAGTTTTTTGAAAGAGCTGGGCTGGCGTTTTTT------------CCT     38

BSNT_01322___     39 TCATGAAGGACAAAGTAAATCAGCGGAGCTGGCGTACTTTTTTCTATTGT     88
                     |||||||||||..||.|||||.|||||.||.||.||||||||||||||||
BL03083___yfk     39 TCATGAAGGACCGAGCAAATCGGCGGAACTTGCCTACTTTTTTCTATTGT     88

BSNT_01322___     89 CACTGTTTCCGTTTTTGATTTT--TATGCTGACGCTCACCGCGTATCTTC    136
                     |.||||||||||||.|||||||  |||  ||||..|.|.||..||.||.|
BL03083___yfk     89 CTCTGTTTCCGTTTATGATTTTCCTAT--TGACATTGATCGGCTACCTGC    136

BSNT_01322___    137 CGCTTTC--TACCGATGATGTTTTAGGAGTCATAGAACAATATGCTCCC-    183
                       ||.||  .||.|..|||||..|.||..|.||.|||||.||||| ||| 
BL03083___yfk    137 --CTGTCAAAACGGGCGATGTCATCGGGCTGATCGAACAGTATGC-CCCA    183

BSNT_01322___    184 ---GCCAGTGCGATGTCTCTCGTTGAATCCATTACCCATCAAACCTTAAA    230
                        |.||   |||||||..||.|||||            .|.|||.|.||
BL03083___yfk    184 GAAGACA---CGATGTCCGTCATTGAA------------GAGACCCTGAA    218

BSNT_01322___    231 TAATCGAAATGGCGGTTTGCTGTCATTCGGGATTATCGCCGCATTATGGT    280
                     ||...||||..|.||..||||.||.||||||||.||.||.||..|.||||
BL03083___yfk    219 TACCGGAAACAGGGGCCTGCTTTCTTTCGGGATCATTGCGGCGCTCTGGT    268

BSNT_01322___    281 CTGCGTCTAATGGAATGAACGCGATCGTCCGGTCGCTGAACCACGCGTAT    330
                     ||||.||.||.|||.||||||||||.|||.||.|..|.|||||.||.|||
BL03083___yfk    269 CTGCATCAAACGGATTGAACGCGATTGTCAGGGCCTTTAACCATGCTTAT    318

BSNT_01322___    331 GATGTGGAAGAAAACCGCTCTTTTATCATTGTTCGTTTAACCTCGATTTT    380
                     ||.||.||.||||||||||||||||||||.|||||..|.||.|||.|..|
BL03083___yfk    319 GAAGTAGAGGAAAACCGCTCTTTTATCATGGTTCGGCTGACATCGCTCCT    368

BSNT_01322___    381 TTTGACGATTGCCATGGTATTTACGATTTTAGTGGCTTTGCTTCTGCCGG    430
                     ||||||....||.|||||.||.||.||.||.||.||..|.||||||||.|
BL03083___yfk    369 TTTGACCGCCGCGATGGTTTTCACAATATTGGTCGCGCTTCTTCTGCCTG    418

BSNT_01322___    431 TATTTGGCCGGGAGATTGGAAGGC--------------TCGC--TTCTGA    464
                     ||||    ||||||       |||              ||||  .|||| 
BL03083___yfk    419 TATT----CGGGAG-------GGCCATCGGCCATTTTATCGCCAATCTG-    456

BSNT_01322___    465 CTTTGTCGGCGCGTCGGATCTGTTTTTATCCGTCTGGGCCGCCATTCGCT    514
                         |.|||..||.||||..|||||.|..|.|..|||.|.||..||||||
BL03083___yfk    457 ----GACGGTACGCCGGAGATGTTTCTGACGGCATGGTCAGCGCTTCGCT    502

BSNT_01322___    515 GGGGTGTCAGCCCGCTTGTGCTTTTGATTGTTTTTTCCGCGCTGTATGTG    564
                     ||||..||||||||||||||||..||||.||.|||.|.||..||||..|.
BL03083___yfk    503 GGGGAATCAGCCCGCTTGTGCTGCTGATCGTCTTTACGGCTTTGTACTTT    552

BSNT_01322___    565 ATTGCGCCGAACAAAAAGCTGTCTCTCCGGTTTGTCATGCCGGGTGCGGT    614
                     .||||.|||||.|||..||||||..|....||.||..|.|||||.||.||
BL03083___yfk    553 TTTGCTCCGAATAAACGGCTGTCATTTAAATTCGTGCTTCCGGGAGCTGT    602

BSNT_01322___    615 CTTTGCGACCATCGGCTGGATCGTTGTCAGCACATTGTTTTCATTTTACG    664
                     ....||||||..||||||||||.|.||||||....||||.||||..||.|
BL03083___yfk    603 TGCAGCGACCGCCGGCTGGATCCTCGTCAGCGTCCTGTTCTCATACTATG    652

BSNT_01322___    665 TCAGCACGTTTGCGAACTATAGCGCCACTTACGGGAGCATCGGGGGAATC    714
                     |||||...|||||.|||||.||.||.||.|||||.|||.||||.||.|||
BL03083___yfk    653 TCAGCGAATTTGCAAACTACAGTGCGACATACGGAAGCCTCGGCGGCATC    702

BSNT_01322___    715 ATCGTTCTGATGATTTGGTTTTACTTGAGCGGCATTTTAATTATCCTAGG    764
                     |||||.||||||||.||||||||.||.|||||.||..|.|||||.||.||
BL03083___yfk    703 ATCGTCCTGATGATCTGGTTTTATTTAAGCGGAATGATGATTATTCTTGG    752

BSNT_01322___    765 CGGAGAAATCAACGCTCTTTTACATAAACGTAAAAAGCTTCCTGATGAAA    814
                     .||.||||||||.||.|||||||||||.|||||||...|||||||.||||
BL03083___yfk    753 AGGGGAAATCAATGCCCTTTTACATAAGCGTAAAATCATTCCTGAAGAAA    802

BSNT_01322___    815 ATCCCTACCATTAG---------    828
                     ||||         |         
BL03083___yfk    803 ATCC---------GCGGAATTGA    816


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01322 and BL03083

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
