Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01313 and BL03080

See DNA alignment / Visit BSNT_01313 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_01313___yfkM.1.5803.seq
#    -bsequence pep-align/BL03080___yfkM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01313___yfkM-BL03080___yfkM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01313___yfkM-BL03080___yfkM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01313___yfkM
# 2: BL03080___yfkM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     140/172 (81.4%)
# Similarity:   154/172 (89.5%)
# Gaps:           1/172 ( 0.6%)
# Score: 723.0
# 
#
#=======================================

BSNT_01313___      1 MGKKIAVVLTDYFEDSEYTEPAKAFKEAGHELTVIEKEKGKTVKGKQGKA     50
                     |.||||||||||||||||||||||||:|||:|||||||||||:|||||:|
BL03080___yfk      1 MSKKIAVVLTDYFEDSEYTEPAKAFKDAGHQLTVIEKEKGKTLKGKQGEA     50

BSNT_01313___     51 EVTVDASIDDVNPSDFDALLIPGGFSPDQLRADDRFVQFTKAFMTDKKPV    100
                     :|..|||||:|:|:||||||||||||||.||||.|||.|.|:||.|||||
BL03080___yfk     51 QVETDASIDEVSPADFDALLIPGGFSPDILRADQRFVSFAKSFMDDKKPV    100

BSNT_01313___    101 FAICHGPQLLINAKALDGRKATGYTSIRVDMENAGADVVDKEVVVCQDQL    150
                     |||||||||||.|||||||.|||||||:||:||||....|:||||||:||
BL03080___yfk    101 FAICHGPQLLITAKALDGRGATGYTSIQVDLENAGVKFKDEEVVVCQNQL    150

BSNT_01313___    151 VTSRTPEDIPAFNRESLALLEK    172
                     ||||||:|||||.||||.||. 
BL03080___yfk    151 VTSRTPDDIPAFTRESLKLLG-    171


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