Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01306 and BL03079
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence pep-align/BSNT_01306___yfkO.1.5803.seq
# -bsequence pep-align/BL03079___nfsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01306___yfkO-BL03079___nfsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01306___yfkO-BL03079___nfsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: BL03079___nfsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 149/227 (65.6%)
# Similarity: 182/227 (80.2%)
# Gaps: 6/227 ( 2.6%)
# Score: 812.0
#
#
#=======================================
BSNT_01306___ 1 --MADLKKQILDAYNFRHATKEFDPNKKVSDSDFEFILETGRLSPSSLGL 48
....|::||||:.||||||||||::|:||.||:||||.|||||||:||
BL03079___nfs 1 MTEQSKKQEILDAFQFRHATKEFDPDRKISDEDFQFILEAGRLSPSSVGL 50
BSNT_01306___ 49 EPWKFVVVQNPEFREKLREYTWGAQKQLPTASHFVLILARTAKDIKYNAD 98
|||:||||||.|.|||||:.:||||.||||||||||:|.||||:::.::.
BL03079___nfs 51 EPWQFVVVQNKELREKLRQVSWGAQGQLPTASHFVLLLGRTAKEMRRDSG 100
BSNT_01306___ 99 YIKRHLKEVKQMPQDVYEGYLSK---TEEFQKNDLHLLESDRTLFDWASK 145
|:...||.||:||:|:.|..|.: .|.||..|.||.||||.:|||.||
BL03079___nfs 101 YVADQLKHVKKMPEDIIENMLKEDGVLESFQDGDFHLYESDRAMFDWVSK 150
BSNT_01306___ 146 QTYIALGNMMTAAAQIGVDSCPIEGFQYDHIHRILEEEGLLENGSFDISV 195
||||||.|||||||.||:||||||||.||.:|.|||:||:||:|.|||||
BL03079___nfs 151 QTYIALANMMTAAALIGIDSCPIEGFNYDKVHDILEKEGVLEDGRFDISV 200
BSNT_01306___ 196 MVAFGYRVRDPRPKTRSAVEDVVKWV- 221
|.||||||::||||||.|::.:||||
BL03079___nfs 201 MAAFGYRVKEPRPKTRRALDQIVKWVE 227
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