Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01306 and BL03079
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_01306___yfkO.1.5803.seq
# -bsequence dna-align/BL03079___nfsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01306___yfkO-BL03079___nfsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01306___yfkO-BL03079___nfsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: BL03079___nfsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 713
# Identity: 488/713 (68.4%)
# Similarity: 488/713 (68.4%)
# Gaps: 76/713 (10.7%)
# Score: 1617.5
#
#
#=======================================
BSNT_01306___ 1 ATGGCAGATCTA---AAGAAACAA---ATTCTGGATGCA-TACAATTTCA 43
|||.||||.|.| |||||.||| |||||.||.||| |.|||||| |
BL03079___nfs 1 ATGACAGAGCAATCCAAGAAGCAAGAGATTCTTGACGCATTCCAATTT-A 49
BSNT_01306___ 44 GGCATGCGACTAAGGAATTTGACCCGAATAAAAAAGTGTCAGA-CAGCGA 92
|.||||||||.||.||||||||.|||.|.|.|||..|.||||| .|| ||
BL03079___nfs 50 GACATGCGACAAAAGAATTTGATCCGGACAGAAAGATATCAGATGAG-GA 98
BSNT_01306___ 93 TTTTGAATTTATTTTAGAAACAGGAAGACTGTCTCCGAGCTCACTCGGCC 142
||||.|.||.|||||||||.|.||.||||||||.||.|||||..||||||
BL03079___nfs 99 TTTTCAGTTCATTTTAGAAGCGGGCAGACTGTCGCCAAGCTCGGTCGGCC 148
BSNT_01306___ 143 TTGAGCCTTGGAAATTTGTCGTCGTCCAAAATCCGGAGTTCCGCGAGAAG 192
|.||.||.|||.||||||||||||||||||||...|||.|.||.||.||.
BL03079___nfs 149 TCGAACCGTGGCAATTTGTCGTCGTCCAAAATAAAGAGCTGCGTGAAAAA 198
BSNT_01306___ 193 CTTCGTGAATACACATGGGGCGCGCAAAAGCAGCTGCCGACCGCAAGCCA 242
||.|||.||..|.|||||||.||.||...||||||.|||||.||.|||||
BL03079___nfs 199 CTGCGTCAAGTCTCATGGGGTGCACAGGGGCAGCTTCCGACAGCCAGCCA 248
BSNT_01306___ 243 TTTCGTCCTGATTCTTGCGCGTACAGCGAAGGATATCAAATATAATGCG- 291
||||||..||.|.||.|..||.||.||.||||| ||||||
BL03079___nfs 249 TTTCGTTTTGCTGCTCGGACGCACGGCTAAGGA----------AATGCGA 288
BSNT_01306___ 292 ---------GACTACAT--CAAACGTCATTTAAAAGAAGTAAAACAAATG 330
|.|||..| ||.| |||.|||||..|.||.|||.|||||
BL03079___nfs 289 CGTGATTCCGGCTATGTTGCAGA--TCAATTAAAGCATGTGAAAAAAATG 336
BSNT_01306___ 331 CCTCAAGACGTGTACGAAGGCTATT-----TAAGCAAAACAGAAGA---- 371
||..|.|||.| .||| ||.||..|| ||||||
BL03079___nfs 337 CCGGAGGACAT----------CATTGAAAATATGCTGAA-AGAAGACGGC 375
BSNT_01306___ 372 ATTCCAGAAA------AA-----CGATTTGCATTTGCTTGAAAGTGACAG 410
.|||..|||| || ||||||.||||||...|||||.|||||
BL03079___nfs 376 GTTCTGGAAAGTTTCCAAGACGGCGATTTTCATTTGTACGAAAGCGACAG 425
BSNT_01306___ 411 AACATTGTTTGACTGGGCATCAAAACAAACCTATATCGCGCTTGGCAACA 460
..|..||||||||||||.||||||.|||||.||.||||||||.|.|||||
BL03079___nfs 426 GGCGATGTTTGACTGGGTATCAAAGCAAACGTACATCGCGCTCGCCAACA 475
BSNT_01306___ 461 TGATGA---CTGCCGCTGCGCAAATCGGTGTTGATTCCTGCCCGATCGAA 507
|||||| ||||||||..| |||||..||||.|||||||||||.|||
BL03079___nfs 476 TGATGACGGCTGCCGCTTTG---ATCGGCATTGACTCCTGCCCGATTGAA 522
BSNT_01306___ 508 GGCTTCCAGTACGATCACA-TTCACCGTATTCTTGAAGAAGAAGGCCTTC 556
|||||..|.||||| ||.| |.|||...||.||||||.|||||||..|..
BL03079___nfs 523 GGCTTTAACTACGA-CAAAGTCCACGACATCCTTGAAAAAGAAGGGGTGT 571
BSNT_01306___ 557 TGGAAAACGGAAGCTTTGATATTTCTGTGATGGTGGCATTCGGCTACCGT 606
||||..|.||..|||||||.||.||.||.||||..||.|||||.||||||
BL03079___nfs 572 TGGAGGATGGCCGCTTTGACATCTCGGTCATGGCCGCTTTCGGATACCGT 621
BSNT_01306___ 607 GTGAGAGACCCTCGTCCGAAAACAAGATCTGCTGTTGAAGATGTTGTGAA 656
||||.|||.||.||||||||.||.|||...||..||||..|..|.|||||
BL03079___nfs 622 GTGAAAGAGCCGCGTCCGAAGACGAGACGGGCGCTTGATCAAATCGTGAA 671
BSNT_01306___ 657 ATGGGTGTAA--- 666
||||||..||
BL03079___nfs 672 ATGGGTCGAATAA 684
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