Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05798 and BL03075
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence pep-align/BSNT_05798___spsC.1.5803.seq
# -bsequence pep-align/BL03075___spsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05798___spsC-BL03075___spsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05798___spsC-BL03075___spsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05798___spsC
# 2: BL03075___spsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 149/403 (37.0%)
# Similarity: 220/403 (54.6%)
# Gaps: 48/403 (11.9%)
# Score: 661.5
#
#
#=======================================
BSNT_05798___ 1 MVQKRNHFLPYSLPLIG--------KEEI-QEVTETLESGWLSKGPKVQQ 41
.:||:. |::| :|....|:||....||||::
BL03075___sps 1 -----------MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEE 39
BSNT_05798___ 42 FEKEFAAFVGAKHAVAVNSCTAALFLALKAKGIGPGDEVITSPLTFSSTA 91
.||..|..:|.|.||||.:.|.||.|.|:|.|||.||||||:|.||.:||
BL03075___sps 40 LEKRIAEKLGVKEAVAVANGTDALVLTLEAFGIGKGDEVITTPFTFFATA 89
BSNT_05798___ 92 NTIIHTGATPVFADIDQNTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDM 141
..:...||.|||||:|..|.|:||.|:|..:||.|||::|||..||..||
BL03075___sps 90 EAVSRVGAEPVFADVDPETYNLDPKKIEEKITPATKAIIPVHIFGQPADM 139
BSNT_05798___ 142 DAILAIAQNHGLFVLEDAAHAVYTTYKQRMIGSIGDATAFSFYATKNLAT 191
|.|:.:|:.|||.|:|||..|...:||:|.:||||||..|||:.||||.|
BL03075___sps 140 DEIMELAKKHGLLVIEDACQAFGASYKERPVGSIGDAACFSFFPTKNLGT 189
BSNT_05798___ 192 -GEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK 240
|:|||:|..|.:.|.::|.|..||.||. |..:..|:.
BL03075___sps 190 LGDGGMVTISDPDAARQLRTLRTHGTSKK------------YFHDKIGFN 227
BSNT_05798___ 241 MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDD 290
..:.:|.||..|..|:::|...::|..:|.||:...:....|..|...:|
BL03075___sps 228 SRLDELHAAALLILLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKED 277
BSNT_05798___ 291 GRHAWHLYVLQVDEKKAGVTRSEMITALKDKYNIGTSVHFIP--VHIHPY 338
..|.:|||.: ....|..:|.:||:: :|.:.|:: | :|:...
BL03075___sps 278 RTHIYHLYCI------GAKNRDYIIQSLKEQ-DIHSGVYY-PCCLHLQSV 319
BSNT_05798___ 339 YQKQFGYKEADFPNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGA 388
| ....||:.|||.|.:..:...::|:.|.::.::.|.:|.|: :.||.
BL03075___sps 320 Y-SSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISAL--LKKGG 366
BSNT_05798___ 389 D-- 389
.
BL03075___sps 367 GEK 369
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