Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01279 and BL03062

See DNA alignment / Visit BSNT_01279 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence pep-align/BSNT_01279___yflN.1.5803.seq
#    -bsequence pep-align/BL03062___yflN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01279___yflN-BL03062___yflN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01279___yflN-BL03062___yflN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01279___yflN
# 2: BL03062___yflN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     174/266 (65.4%)
# Similarity:   209/266 (78.6%)
# Gaps:           4/266 ( 1.5%)
# Score: 911.0
# 
#
#=======================================

BSNT_01279___      1 MSDPYMPLTSVRSGTGFEAAKGVHGLTVQIANVYFIQLPSEPHSFVLIDA     50
                     |||||||||||.||...|.|:||.||||||.|||||..| :....|||||
BL03062___yfl      1 MSDPYMPLTSVNSGVLEEYAEGVFGLTVQIVNVYFIFDP-DSREAVLIDA     49

BSNT_01279___     51 GMPQSAGMIVNEAKQRFGEGFQLKAIILTHGHFDHIGAIEEILEHWDVPV    100
                     |||:||..|:.|||:|||: |:||.|:||||||||:||:|.:||.|.|||
BL03062___yfl     50 GMPKSAPFILREAKERFGD-FRLKGIVLTHGHFDHVGALESLLETWPVPV     98

BSNT_01279___    101 YVHSREMPYVTGKEDYPPARPDSKSGLVAKLSPLFPRHSIDISSHVQALP    150
                     |.|.:||||:.||.|||||:|..|||||||:|||||||||:|||||:.|.
BL03062___yfl     99 YAHEKEMPYLMGKADYPPAKPQVKSGLVAKMSPLFPRHSINISSHVKQLN    148

BSNT_01279___    151 EDGSVPFLDEWMWIATPGHTPGYISLFRDDGRVLVAGDAVITVEQEKMAD    200
                     :|||:|||:.|.||.|||||||::||||...|.|:|||||.|||||.:.:
BL03062___yfl    149 KDGSLPFLEGWKWIETPGHTPGHVSLFRQSDRTLIAGDAVTTVEQESLFE    198

BSNT_01279___    201 VLIQKQELHGPPAYFTPDTETAAESILKLAGLEPEALLTGHGIPMTGKNF    250
                     |.||||||:|||||||.|...||:|:.|||||:|.|||||||:||.|.:|
BL03062___yfl    199 VAIQKQELNGPPAYFTMDWTKAADSVRKLAGLKPAALLTGHGVPMKGSDF    248

BSNT_01279___    251 RSDLTELANRLSSI--    264
                     ...|.:|::||.:.  
BL03062___yfl    249 SEALLDLSDRLPASDS    264


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.