Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01416 and BL03055

See DNA alignment / Visit BSNT_01416 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01416___yfhF.1.5803.seq
#    -bsequence pep-align/BL03055___yfhF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01416___yfhF-BL03055___yfhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01416___yfhF-BL03055___yfhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01416___yfhF
# 2: BL03055___yfhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     185/304 (60.9%)
# Similarity:   229/304 (75.3%)
# Gaps:           6/304 ( 2.0%)
# Score: 989.0
# 
#
#=======================================

BSNT_01416___      1 MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNAREAEQKNMTYVQWLSE     50
                     |.||:.|||||:|:|||..||.:|||||||:|...|.||||.::|.|...
BL03055___yfh      1 MKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKN     50

BSNT_01416___     51 GAAPEQELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQ    100
                     ||.||::|..|||||||||||:||||.||||..|.:||:.:..|..|:||
BL03055___yfh     51 GARPEKDLTDIDVWINLAGKSLFGRWNEKTKAEIATSRLRSVEESARIIQ    100

BSNT_01416___    101 KQKEKPQTLIQASAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQ    150
                     ..::||.||||||||||||||||:||||:|..|.|||||.|..|||:..:
BL03055___yfh    101 SLQKKPNTLIQASAVGIYGTSLEQTFTEESPVSAEDFLSRTTALWEQAAE    150

BSNT_01416___    151 HIEAMGIRTVYARFGVMLG-EKGALPLMILPYKFLAGGTIGTGRQWLSWI    199
                     .|||:|||||:.|||::|| :.||||.|.|||:..|||.||:||||:.||
BL03055___yfh    151 PIEALGIRTVWMRFGLVLGKDGGALPKMALPYQLFAGGRIGSGRQWVPWI    200

BSNT_01416___    200 HVEDAAQMIRYAVENAGISGPMNVTAPNPVDMKQFGKTIARVKHRPHWLP    249
                     |:|||..||..|:|...:|||:||||||||.|..||:|:|:|:.||||||
BL03055___yfh    201 HIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTVAKVEKRPHWLP    250

BSNT_01416___    250 VPEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEFALSQLIAD    299
                     ||||.:...|||||:|::||||.|||||:.:|:.|.|.|||.||..|:| 
BL03055___yfh    251 VPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA-    299

BSNT_01416___    300 RKTV    303
                         
BL03055___yfh    299 ----    299


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