Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01361 and BL03018

See DNA alignment / Visit BSNT_01361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01361___yfiA.1.5803.seq
#    -bsequence pep-align/BL03018___glvR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01361___yfiA-BL03018___glvR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01361___yfiA-BL03018___glvR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01361___yfiA
# 2: BL03018___glvR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     176/257 (68.5%)
# Similarity:   210/257 (81.7%)
# Gaps:           4/257 ( 1.6%)
# Score: 913.0
# 
#
#=======================================

BSNT_01361___      1 MQLEELINQHYSKLNDNDFHILKYILNHKHTCYHLGIDALAKACSVSRSS     50
                     ||||||:|:||.|||:||||:|||||||:.|||.|||:.|||.|:|||:|
BL03018___glv      1 MQLEELMNKHYKKLNENDFHVLKYILNHQDTCYKLGINELAKKCNVSRTS     50

BSNT_01361___     51 ILRLAQKLGFSGYSEFRVFLKWEDQPEEGE---SMSFQKLLDDIEANLKF     97
                     ||||:|||.||||||||||||||.:..|.|   ..||:.|:.|:||::|:
BL03018___glv     51 ILRLSQKLDFSGYSEFRVFLKWEAEKREEEREDCRSFESLMRDMEASMKY    100

BSNT_01361___     98 LRTKDMTDMCQLIDEADRIFVYGSGNAQKICARDLQRMFIPRHRYLILIE    147
                     |:..|:..|||||||||||||||||.||..||.:|||||:.:||||.:|:
BL03018___glv    101 LKNTDLRKMCQLIDEADRIFVYGSGTAQTTCAYELQRMFVSQHRYLTVIK    150

BSNT_01361___    148 DTNEFNLMRDDFKVNDLFIIISLSGETPELIPQARMLSAKGIPFISITNL    197
                     |..:|:||..||...||.||||||||||.|||||:.||||||||||:|||
BL03018___glv    151 DQIDFDLMFPDFSTADLIIIISLSGETPSLIPQAQSLSAKGIPFISLTNL    200

BSNT_01361___    198 KNNVLAQLTPHNLYATSKPVTLSDKTEIVAFAPFFLVGEALFRAYVDYKE    247
                     |||:||||||:||||.|:.||:..|||:.||||||||||||||:||||.|
BL03018___glv    201 KNNLLAQLTPYNLYAPSQTVTVYPKTELTAFAPFFLVGEALFRSYVDYAE    250

BSNT_01361___    248 AEKNDNE    254
                     .:||.. 
BL03018___glv    251 EKKNQE-    256


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