Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01351 and BL03016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_01351___acoR.1.5803.seq
# -bsequence pep-align/BL03016___acoR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01351___acoR-BL03016___acoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01351___acoR-BL03016___acoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01351___acoR
# 2: BL03016___acoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 620
# Identity: 344/620 (55.5%)
# Similarity: 440/620 (71.0%)
# Gaps: 24/620 ( 3.9%)
# Score: 1751.0
#
#
#=======================================
BSNT_01351___ 1 MNSVPNDLQTWKRFVKDGVLDEARLRKRIAESWHRCKKAEVNPYLEKGPK 50
||..|..|.||||||::|:||:|||.||:.|||:|||...|||||:||..
BL03016___aco 1 MNPTPCYLNTWKRFVQEGLLDQARLNKRVMESWYRCKNRNVNPYLDKGQS 50
BSNT_01351___ 51 VLQQTELDQQSKKHSFFLTTAKPYLEKLLPAIKEMEMMALLIDSDGVVLA 100
:|::...|.|.||||.||..|.|||..:...:||.||||||||:||.||:
BL03016___aco 51 ILKKDLFDAQKKKHSLFLDIALPYLHNISRELKESEMMALLIDADGYVLS 100
BSNT_01351___ 101 LDGHSRALYEAKRINFVEGACWTETAVGTNAIGTALHISEPVAIQGSEHY 150
|.|..|.|.|||:||||||..||||.||||||||||.|.|.|.|.|:||:
BL03016___aco 101 LAGCRRTLEEAKKINFVEGVRWTETEVGTNAIGTALEIGEAVTIHGTEHF 150
BSNT_01351___ 151 SIASHLWNCSAAPIHHEDGSLAGVIDISCPAAGAHPHMLGIATAIAYAAE 200
|:|||.|:||||||..|||::.|:|||||.....||.|||:|...|:|.|
BL03016___aco 151 SVASHHWSCSAAPIRDEDGTVMGLIDISCLTDRRHPFMLGMAATAAHAIE 200
BSNT_01351___ 201 RELAAKSREKELELISRFGERAASSVPMVLCNTKQHIISASIPIRTSIPD 250
||::|.:::.|.||||...|:..|..|.::||.|..|::||.|:|....|
BL03016___aco 201 REISAHTKKNEAELISHCLEKIDSDQPFIVCNEKDKIVAASRPVRERFSD 250
BSNT_01351___ 251 WQGRHLYELKERGYSIEKAVTI---GDG---GTCFYLSEQKKKKV----- 289
|:...:.:|.|||::.....|| .|| |....|:|..:.|.
BL03016___aco 251 WRRMDVNDLYERGFAGGHKQTIFSAKDGRPLGKSIALAEVSRNKTAPSLV 300
BSNT_01351___ 290 --FRFNGVIGQSGRSQAMLMNLERAAAADATVCLSGETGTGKEVAARALH 337
|.:.|..|.|...|..|.::..||..||.|.:.||||:|||:||||:|
BL03016___aco 301 SRFIYPGETGTSRAFQQALHHMRLAAKTDANVYIWGETGSGKELAARAIH 350
BSNT_01351___ 338 ENSERRHGPFIAVNCGAIPSDLIESELFGYAEGAFTGAKRNGYKGAFQKA 387
:.|.||:||||||||||||..|:|||||||||||||||||.|.||.|::|
BL03016___aco 351 QASARRNGPFIAVNCGAIPESLMESELFGYAEGAFTGAKRRGSKGKFEQA 400
BSNT_01351___ 388 NQGTLFLDEIGEISHSMQVALLRVLQERKITPIGGTKEIPVDIRVIAATH 437
::||:||||||||.:.|||||||:::|||:||||||:|:|:|||:|.|||
BL03016___aco 401 HRGTIFLDEIGEIPYQMQVALLRIIEERKVTPIGGTREVPLDIRIITATH 450
BSNT_01351___ 438 CDLRELAENGKIREDLFYRLHVYPIELPPLRDRTEDIPDLFEHYKQKNHW 487
.||::|.:.|||||||:|||||||:::||||:|.|||||||.||:|::.|
BL03016___aco 451 RDLKDLLQKGKIREDLYYRLHVYPVKIPPLRERKEDIPDLFRHYQQQHEW 500
BSNT_01351___ 488 PGELPSDFCNVLKQWKWPGNIRELFNVFERLSIRFPDGRLRDEPLPALLE 537
..|.|.:|...|:::.||||||||||.||||.:.||:|.|.| |:...
BL03016___aco 501 KAEFPPNFFKRLQEYHWPGNIRELFNTFERLRVLFPEGGLID---PSQYS 547
BSNT_01351___ 538 AA--GLPASSAEKKPAAAGVLTFREQIQKDMMIKALESAKGNVSQAAKIS 585
|. ||..:|. .|:....|||||::||..|::||:..|||||:|||::
BL03016___aco 548 AVLDGLDWNSG--APSEEDRLTFRERVQKQTMMEALQKTKGNVSEAAKLA 595
BSNT_01351___ 586 GIPRSTFYKRLKKFNLSAES 605
|||||||||||:|:||
BL03016___aco 596 GIPRSTFYKRLRKYNL---- 611
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