Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01344 and BL03012
See
DNA alignment /
Visit
BSNT_01344 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_01344___acoA.1.5803.seq
# -bsequence pep-align/BL03012___acoA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01344___acoA-BL03012___acoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01344___acoA-BL03012___acoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01344___acoA
# 2: BL03012___acoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 250/335 (74.6%)
# Similarity: 285/335 (85.1%)
# Gaps: 13/335 ( 3.9%)
# Score: 1339.0
#
#
#=======================================
BSNT_01344___ 1 MKLLKREGLSLTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYA 50
..| :||:|||:||||||||||.|||:||:|||:|:|||||||||
BL03012___aco 1 ----MEE--ALTKEKAVWMYQKMLEIRYFEDQVHQLFAKGILPGFVHLYA 44
BSNT_01344___ 51 GEEAVAVGVCAHLHDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGL 100
||||||.||||||:|.|:||||||||||||||||||.||||||:||:.||
BL03012___aco 45 GEEAVAAGVCAHLNDEDTITSTHRGHGHCIAKGCDLKGMMAEIYGKSAGL 94
BSNT_01344___ 101 CKGKGGSMHIADLDKGMLGANGIVGGGFTLACGSALTAKYKQTKNVSVCF 150
||||||||||||.|||||||||||||||.||||:|||||||:||||||||
BL03012___aco 95 CKGKGGSMHIADFDKGMLGANGIVGGGFPLACGAALTAKYKKTKNVSVCF 144
BSNT_01344___ 151 FGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPFEYASACDSIA 200
||||||||||||||:||||:|.|||:||||||||||||||.|||:|:|||
BL03012___aco 145 FGDGANNQGTFHEGINLAAIWKLPVIFVAENNGYGEATPFSYASSCESIA 194
BSNT_01344___ 201 DRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250
||||||.:|||.|||||..||:|||..|||||:||.||:|||||||||||
BL03012___aco 195 DRAAAYGIPGVRVDGKDAAAVFQAAGRAIERAKNGEGPTLIECMTYRNYG 244
BSNT_01344___ 251 HFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKE--TDANKLSDIEQRV 298
|||||||.|||.:|:..|.||||||..||:.||.: ....:.|.||:.|
BL03012___aco 245 HFEGDAQRYKTNEEKAVHQEEKDAIAVFKSELLAKGLMSEEEQSRIEKEV 294
BSNT_01344___ 299 SESIEKAVSFSEDSPYPKDSELLTDVYVSYEKGGM 333
.|::|:||:|||.|.||:::||||||||||
BL03012___aco 295 EEAVEEAVAFSEKSAYPEETELLTDVYVSY----- 324
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.