Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04996 and BL03006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:11
# Commandline: needle
# -asequence pep-align/BSNT_04996___bdbD.1.5803.seq
# -bsequence pep-align/BL03006___bdbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04996___bdbD-BL03006___bdbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04996___bdbD-BL03006___bdbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04996___bdbD
# 2: BL03006___bdbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 127/232 (54.7%)
# Similarity: 167/232 (72.0%)
# Gaps: 11/232 ( 4.7%)
# Score: 664.5
#
#
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BSNT_04996___ 1 MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQP 50
|||||||..|||||:|||||.|:.|:|:|||:|:..:.....:||.:|||
BL03006___bdb 1 MKKKQQSPMKFAVIMTVVVVFLIGALVVINNQTQNASQTFDDKPSTEGQP 50
BSNT_04996___ 51 VLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 100
:||..||.||:.|||||||||||.:...:||.::||:|||..|.||::|.
BL03006___bdb 51 LLGNKDAAVTITEFGDYKCPSCKQWTETVFPDLKKDYIDKDQVNFSYINF 100
BSNT_04996___ 101 M--FHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDT---EQEWVT 145
: .||:||.|:|||||:||||||||||.|||.|::.|||. |.||.|
BL03006___bdb 101 VNEQHGRGSELSALASEQVWKEDPDSFWKFHEALYKAQPDNDTMENEWAT 150
BSNT_04996___ 146 PGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTI 195
|..|.|:.::.||||.:.|..:|:.:|||.|::.|:.|..|..:.:||||
BL03006___bdb 151 PAKLADITEANTKIKRDKLVSSLNDKTFAEQLKTDNSLINKYGVDSTPTI 200
BSNT_04996___ 196 YVND-KVIKNFADYDEIKETIEKELKGK---- 222
:||. |:.|.| |||:|||||||||||:
BL03006___bdb 201 FVNGVKIDKPF-DYDKIKETIEKELKGQSDEK 231
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