Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02496 and BL03002
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_02496___ylbM.1.5803.seq
# -bsequence pep-align/BL03002___ylbM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02496___ylbM-BL03002___ylbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02496___ylbM-BL03002___ylbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02496___ylbM
# 2: BL03002___ylbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity: 249/417 (59.7%)
# Similarity: 316/417 (75.8%)
# Gaps: 3/417 ( 0.7%)
# Score: 1284.0
#
#
#=======================================
BSNT_02496___ 1 MKAVGLVVEYNPFHNGHLYHAQTAKRQTGCDTAVAVMSGHFLQRGEPAVV 50
||||||||||||||||||||.:.||.:|..:.|||||||.||||||||:|
BL03002___ylb 1 MKAVGLVVEYNPFHNGHLYHIKEAKSETRSEVAVAVMSGSFLQRGEPAIV 50
BSNT_02496___ 51 SKWARTKMALQSGVDLVIELPYLYAVQKADIFARGSVSILNELECKALFF 100
||||||||||.|..|:|:||||::|||||:.||.|:|||||||.|.:|||
BL03002___ylb 51 SKWARTKMALASFADVVVELPYIFAVQKAETFAEGAVSILNELGCSSLFF 100
BSNT_02496___ 101 GSENGDIKPFLETAQLIGEHKHTFDDRIKEELKTGTSYPAAAASAFSSIL 150
|||:|||:.||.||....||:...::..::::..|.|||.|.|.||.|:.
BL03002___ylb 101 GSEHGDIEAFLNTAAHTIEHEDRLNEEARKQIAFGLSYPQAMAKAFRSVT 150
BSNT_02496___ 151 HT-ESALDLSKPNNILGYQYVTSVLTGGYPMKPYTTARISSDYHDADLPE 199
.. .:.:||||||||||:.||.:::.....|||.|..|.||.|||:..||
BL03002___ylb 151 REGGNIVDLSKPNNILGFHYVKAIMQKQLSMKPETVKRRSSGYHDSTFPE 200
BSNT_02496___ 200 GENHIASATSIRKAMTGQNLEACLRF-LPAASARELAAYRKSFGLWHTPE 248
.: .|||||||||::......|..|| ||..:..||..|.::||:||:||
BL03002___ylb 201 AD-RIASATSIRKSIFETGSLADSRFYLPKTTVDELDEYARTFGMWHSPE 249
BSNT_02496___ 249 SYFSYLKYSLSTVTAQELQQVYEVEEGLEHRILRSIRKSSSYQEFMELLK 298
.||.:|||||.|:..:||:.:||||||||||:.::|||:.|::|:|||||
BL03002___ylb 250 DYFPFLKYSLHTMDTEELKGIYEVEEGLEHRVKKAIRKAGSFKEYMELLK 299
BSNT_02496___ 299 TKRYTWTRLQRMNTHILTRTKKQDMQKLLDNDKAPYIRLLGMTKKGQAYL 348
||||||||||||||||||:|||.|::::|:.....|||||||||||||||
BL03002___ylb 300 TKRYTWTRLQRMNTHILTKTKKADVKRMLNETHPAYIRLLGMTKKGQAYL 349
BSNT_02496___ 349 SEKKKALSVPLVSKLSSFSHPALDLDVKASRIYSLPIEEPLRTEFDLQEY 398
:||||:||.||::|..|||||:|.||:||.::||.|::||:||....|||
BL03002___ylb 350 AEKKKSLSAPLITKTGSFSHPSLQLDIKAGQVYSAPLKEPVRTMLTEQEY 399
BSNT_02496___ 399 GHAPIRYDEDEQHFLNV 415
..:|||||||.:.||..
BL03002___ylb 400 SLSPIRYDEDSRIFLRK 416
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