Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02470 and BL02999

See DNA alignment / Visit BSNT_02470 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_02470___ctaA.1.5803.seq
#    -bsequence pep-align/BL02999___ctaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02470___ctaA-BL02999___ctaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02470___ctaA-BL02999___ctaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02470___ctaA
# 2: BL02999___ctaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     216/306 (70.6%)
# Similarity:   251/306 (82.0%)
# Gaps:           4/306 ( 1.3%)
# Score: 1130.5
# 
#
#=======================================

BSNT_02470___      1 MNKALKALGVLTTFVMLIVLIGGALVTKTGSGQGCGRQWPLCHGRFFPEL     50
                     ||||||.||::||..||.||||||||||||||.||||.||||:|..||.|
BL02999___cta      1 MNKALKGLGIITTIAMLFVLIGGALVTKTGSGMGCGRSWPLCNGSIFPAL     50

BSNT_02470___     51 NPASIIEWSHRFASGISIILVLSLAFWSWRKITPIFRETTFLAIMSIIFL    100
                     ...|||||||||.||.|.:|||:||.|:|:||..| |||.|||:||::||
BL02999___cta     51 TLESIIEWSHRFVSGTSGVLVLALAIWTWKKIGHI-RETKFLAVMSVVFL     99

BSNT_02470___    101 FLQALLGALAVVFGSNALIMALHFGISLISFASVLILTLLIFEADKSVRT    150
                     .|||||||.||||||:|||||||||||||||||||:||||:||||...::
BL02999___cta    100 ILQALLGAAAVVFGSSALIMALHFGISLISFASVLLLTLLVFEADSKQKS    149

BSNT_02470___    151 LVKPLQIGKKMQFHMIGILIYSYIVVYTGAYVRHTESSLACPDVPLCSPL    200
                       :...|||.||||||||:||:|:|||||||||||.|||||.|.|:||..
BL02999___cta    150 --ESFYIGKTMQFHMIGIIIYTYVVVYTGAYVRHTSSSLACLDFPMCSTE    197

BSNT_02470___    201 NNGLPTQFHEWVQMGHRAAALLLFVWIIVAAVHAITSYKDQKQIFWGWIS    250
                     |..||.:|||||||||||||||||.|||.|||||...||:||:|:|||:.
BL02999___cta    198 NGWLPGKFHEWVQMGHRAAALLLFAWIIAAAVHAARQYKNQKRIYWGWMI    247

BSNT_02470___    251 CLIFITLQALSGIMIVYTELALGFALAHSFFIACLFGVLCYFLLLIARFR    300
                     .||.|.|||.|||.:||:.|.|||||||:|||:||||:|||||||:||:|
BL02999___cta    248 SLILIILQAASGIAVVYSRLDLGFALAHAFFISCLFGILCYFLLLVARYR    297

BSNT_02470___    301 YESRQS    306
                     .:.:: 
BL02999___cta    298 RQVQK-    302


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.