Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02470 and BL02999
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_02470___ctaA.1.5803.seq
# -bsequence dna-align/BL02999___ctaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02470___ctaA-BL02999___ctaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02470___ctaA-BL02999___ctaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02470___ctaA
# 2: BL02999___ctaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 965
# Identity: 661/965 (68.5%)
# Similarity: 661/965 (68.5%)
# Gaps: 100/965 (10.4%)
# Score: 2021.0
#
#
#=======================================
BSNT_02470___ 1 ATGAATAAAGCATTAAAA-GCTCTCGGTGTTCTGACGACATTTGTCATGC 49
|||||||||||||||||| ||| |.||..||.|.||.||..|.|.|||||
BL02999___cta 1 ATGAATAAAGCATTAAAAGGCT-TGGGAATTATCACAACTATCGCCATGC 49
BSNT_02470___ 50 TAATTGTTTTAATCGGGGGTGCCCTCGTTACAAAAACAGGTTCCGGCCAA 99
|..|.||..|.|||||.||.||||||||.|||||.||.|||||.|| ||
BL02999___cta 50 TTTTCGTGCTGATCGGCGGCGCCCTCGTCACAAAGACGGGTTCAGG--AA 97
BSNT_02470___ 100 --GGATGCGGCAGACAGTGGCCGCTGTGTCACGGCCGTTTTTTCCC---- 143
||.|||||||||...||||||||.||..||||..|..|.|||||
BL02999___cta 98 TGGGCTGCGGCAGATCTTGGCCGCTTTGCAACGGAAGCATATTCCCGGCT 147
BSNT_02470___ 144 TGAAC---TGAATCCGGCTTCAATTATTGAATGGAGCCACCGATTCGCAA 190
|.||| |||| ||.|||||.||||||||||||.|.||.|..|
BL02999___cta 148 TTAACCCTTGAA-------TCGATTATCGAATGGAGCCACAGGTTTGTCA 190
BSNT_02470___ 191 GCGGAATCTCTATTATCCTTGTGCTAAGC-CTTGCGTTTTGGTCATGGAG 239
||||.|..||.....|||||||||| .|| ||.||..|||||.||||||.
BL02999___cta 191 GCGGCACATCCGGCGTCCTTGTGCT-GGCTCTCGCCATTTGGACATGGAA 239
BSNT_02470___ 240 AAAAATCACGCCGATTTTTC-GTGAAACAACGTTTCTCGCGATCATGTCA 288
||||||| .||| .|.|| |.|||||.|..|||||||||.|.|||||.
BL02999___cta 240 AAAAATC-GGCC---ATATCAGAGAAACGAAATTTCTCGCGGTGATGTCG 285
BSNT_02470___ 289 ATTATCTTTTTATTTCTTCAGGCATTGCTT---GGCGCATTG--GCTGTC 333
.|..|||||.|..|||||||||| |||| ||||| || ||.|||
BL02999___cta 286 GTCGTCTTTCTCATTCTTCAGGC---GCTTTTGGGCGC--TGCAGCGGTC 330
BSNT_02470___ 334 GTATTCGGTTCGAAC-GCGCTGATTATGGCGCTTCACTTCGGCATCTCAT 382
||.|||||.|| |.| ||.|||||.|||||..|.||||||||.|||||..
BL02999___cta 331 GTCTTCGGGTC-ATCGGCCCTGATCATGGCTTTGCACTTCGGAATCTCGC 379
BSNT_02470___ 383 TAATTTCTTTTGCTTCAGTGCTTATTTTAACATTGCTCATATTTGAAGCT 432
|.|||||.||||||||.|||||..||||.||..|.||..|.|||||||||
BL02999___cta 380 TTATTTCCTTTGCTTCTGTGCTGCTTTTGACGCTCCTGGTGTTTGAAGCT 429
BSNT_02470___ 433 GATA--AATCAG---TCAGAACACTGGTTAAGCCGCTTCAAATCGGCAAA 477
||.| ||.||| ||.||| .||.||.|.||.||.|||
BL02999___cta 430 GACAGCAAACAGAAATCCGAA-----------TCGTTTTATATAGGAAAA 468
BSNT_02470___ 478 AAGATGCAATTTCACATGATAGGAATTTTGATATATTCCTATATCGTTGT 527
|..|||||.|||||.|||||||||||..|.|||||..|.|||.||||.||
BL02999___cta 469 ACCATGCAGTTTCATATGATAGGAATCATTATATACACATATGTCGTCGT 518
BSNT_02470___ 528 GTATACAGGCGCATATGTAAGACACACTGA-ATCAAGTCTGGCATGTCCT 576
.|||||||||||||||||..|.||.|| || .|||||.||.||.||.|.|
BL02999___cta 519 TTATACAGGCGCATATGTCCGGCATAC-GAGTTCAAGCCTCGCGTGCCTT 567
BSNT_02470___ 577 GATGTGCCGCTGTGCAGCCCGCTGAACAATG---GGCTTCC---GACCCA 620
||..|.|||.||||||||.|| ||| ||.| ||||||| || |
BL02999___cta 568 GACTTTCCGATGTGCAGCACG--GAA-AACGGCTGGCTTCCCGGGA---A 611
BSNT_02470___ 621 ATTCCATGAATGGGTGCAAATGGGCCACAGAGCAGCAGC-CTTACTGTTA 669
.||.||.|||||||||||.|||||.||||||||.||.|| ||| ||..|.
BL02999___cta 612 GTTTCACGAATGGGTGCAGATGGGACACAGAGCTGCGGCGCTT-CTTCTG 660
BSNT_02470___ 670 TTTGTATGGATTATTGTTGCCGCTGTTCATGC--TATTACTTCCTATAAA 717
||.|..|||||.||.|..||.||.||.||||| .|..|| ..||||||
BL02999___cta 661 TTCGCCTGGATCATCGCGGCAGCGGTACATGCAGCAAGAC--AGTATAAA 708
BSNT_02470___ 718 GATCAAAAACAAATCTTTTGGGGTTGGATCTCATGT--CTTATTTTTATT 765
.|||||||||..||.|.||||||.|||| |.||.| ||.||..|.||
BL02999___cta 709 AATCAAAAACGCATTTATTGGGGCTGGA--TGATTTCCCTGATCCTGAT- 755
BSNT_02470___ 766 ACAT--TACAGGCACTG--TCCGGTATTATGATCGTATACA-CTGAACTC 810
||| |.|||| ||| ||.||.|||..|.|.||.|||| |.| |||.
BL02999___cta 756 -CATCCTTCAGG--CTGCCTCAGGAATTGCGGTTGTCTACAGCAG-ACTG 801
BSNT_02470___ 811 GCTCTGGGTTTTGCACTTGCCCACTCGTTCTTTATTGCCTGTCTGTTTGG 860
|.|.|||||||||||||.||||||.|.|||||||||.||||.|||||.||
BL02999___cta 802 GATTTGGGTTTTGCACTCGCCCACGCATTCTTTATTTCCTGCCTGTTCGG 851
BSNT_02470___ 861 CGTTCTATGCTACTTCTTATTATTGATTGCTCGTTTC-CGTTAT-GAATC 908
..|.||.|||||||||.| ..||||.|||.| ||.||| |.|..
BL02999___cta 852 AATCCTTTGCTACTTCCT-------GCTGCTTGTTGCGCGCTATCGCAGG 894
BSNT_02470___ 909 CAG--GCAATCATAA 921
||| ||||..||||
BL02999___cta 895 CAGGTGCAAAAATAA 909
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