Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02462 and BL02997
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence pep-align/BSNT_02462___ylaJ.1.5803.seq
# -bsequence pep-align/BL02997___ylaJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02462___ylaJ-BL02997___ylaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02462___ylaJ-BL02997___ylaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02462___ylaJ
# 2: BL02997___ylaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 119/210 (56.7%)
# Similarity: 144/210 (68.6%)
# Gaps: 7/210 ( 3.3%)
# Score: 579.0
#
#
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BSNT_02462___ 1 MRILF-IIVQLTLILSACAYQQGKQGQNVEKESTRQQETKPIHVKDTTQE 49
|||.| |::|..::||||..| .|...|:......:|||||::.||
BL02997___yla 1 MRIFFLILIQTVMLLSACGIQ-----NNARNEANELPGNRPIHVKNSAQE 45
BSNT_02462___ 50 TKDNGTRTDIAKHLVSVAEKNPDVKDATAVVLGGYAVVGIDVDDTLDRSK 99
..:......|::.||.:.|..|.|.||||||||..|||||||.|.|:|||
BL02997___yla 46 PVNREDGQAISRRLVKITESVPGVNDATAVVLGRLAVVGIDVKDNLERSK 95
BSNT_02462___ 100 VETIKYSVAQALKNDRYGANAVVIADPDTVGRLREMSREISEGHPVTGIL 149
||:||||||:||:||.|||||.|:||||||.|||.|.|||..|.||.|||
BL02997___yla 96 VESIKYSVAEALQNDPYGANAAVVADPDTVNRLRAMGREIQAGRPVKGIL 145
BSNT_02462___ 150 DELAAIVGRVLPEVPNDVIDNEDEPQTKQQNDQLNRKQQQEMEKEQNDQS 199
|||||||||||||||||..||:....||..|||||.:.|:::||:||:||
BL02997___yla 146 DELAAIVGRVLPEVPNDATDNQQTNPTKSNNDQLNERNQKQLEKKQNNQS 195
BSNT_02462___ 200 DHHMKKNNND 209
:.|||....
BL02997___yla 196 NKHMKNRQQ- 204
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